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scnpilot_solids1_trim150_scaffold_392_10

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(9854..11842)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QI09_SHELP similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 608.0
  • Bit_score: 279
  • Evalue 7.20e-72
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 608.0
  • Bit_score: 279
  • Evalue 2.30e-72
TonB-dependent receptor {ECO:0000313|EMBL:ABO25107.1}; Flags: Precursor;; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella loihica (strain ATCC BAA-1088 / PV-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 608.0
  • Bit_score: 279
  • Evalue 1.00e-71

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Taxonomy

Shewanella loihica → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1989
ATGCCTGGCCAAGTTGCACGCAGGGCTTTCGGTACGGTGGTGGCTGCGCTGTCGTTCGGGGCCGTACCTGGCCTCGCCACGGCGGTCACCGAGACCACGGAGCTGCGCATCACCCAGGATGCGGCAGGTGCCGAACGCCGCGGCGGTGACCGCCGCGGCGAGGCTGCGGCCGGGGACGTGGAGGTCTGGCACGGCGAGCCGGTCAAGGTCACCGCGCGCGGCACCGTGGCCGACTGGCCGGAGGCCCTGGCCATCGACACCATGAATTACGACCTGGCGATTGCCGAGCCGGCCGACTTCCAGGACTGGATCACCCGGCTTCCCGGCGTCGGCGCCACCGGGCAGAGCGGCCTGTTCGAGACCTTTTCCATCCGCGGCAGTGGCGGCAACGGCATCCTGATCCTGACCGCCGGCGTGCCGGTGGCGGCACAGCGTCGTGCCGGTGTGCCGGTGTCCTTCGTCGAGCCGGTGCTGCTCGGCGACGTGAGTGTCACGCGCGGGCCGTCGGTGGTGCATTTCGGTCCCGGCGCGCTCGGCGGGGCGGTGTCCATGGAGCCACGCTGGTTCAAGGCGCCGTTCGTCACCGCCGGCTATGCCAGCGGCGGCGACGAGTTCCTGCTCGCCACCGGCACCGGCGGCGAGGGCTTCTCGCTGGCCGCAGCCCGCCATCGTGCCGGCGACAGCAAGGCGCCGAACGGCACCCCGCTCAACACCAGCTACGCCCGCGACAGCGCCACGCTGCAGCTCCAGCACCGCTTTGGGGCAATGAATGTTGACGCCCTGCTGATGCCCTCACGCACCCGGGGCATCGGCAAATCCAATTCGCGCTACCCGGACAGTCAAGTCACCGACTACCCGAGGGACGACCACACCATCGGCCGTCTGCGCCTGCAGCATGACCGTGGGTTCGAGGCCAGCGTGTATGCCCACGACCAGGAGCTCACCACCTTCAAGCGCACCCCGCGCAAGGCCAATGCCTATGCCTCCATCGCCAGCACCGATGGCGGCGGTACCGTGCAGCAGAGCTGGCGCCGCGGCGCGTTCAAGAACAACGTCGGCGTCGAGTATTTCGGGCGCCGCGACGTGACCGGCTACGACGCCAGCGGCACCCCCGGCGACCGCACCTACAGCCTGGACGGCGCCAGCGAGGACTCGTGGTCGCTGTTCGGGATCACCGACTGGCGGCTGGCTGGCGCGTTCAGCCTCGAGCTTGGCGCCCGGACCACCTGGATCGCCCAGCACCAGTCCGGGGCGACATCGCGCGATTCCGATGCGGCGGTGACCGCGGCGGCTGTGTGGACCCCGGACGAGTCCTCGCGCTGGAGCCTCAACCTGGCCTCCGGCTACCGCTTCGCCTCGCTGGAGGAGCGCTTCTTCAGCGGGGTGACCGGGCGTGGCGAGATCGTCGGCAACCCGGACCTGGGATCGGAGCATTCGCTGGGCGTCGATCTGGGCCACGCCTGGTGGCATGGTGACTGGAGTACCCAGGCACATGTGTGGCGCACCAACGTGCGCGACCTGATCCAAAAGGTGACGCTGTCGCCGGACGTGGAAGGCTATGTGAACGTCGGCAAGGCCAAACTGTATGGGGCCGAGGCCGTGGTCGGCTGGACTCCCCTGGACAGCGGCTGGTCGCTGCACGCCAATGCGGCTGTGGTGCGCGGGGAGGATCGTGACAGTGGGCAACCAGTCTATGGTATCCCGCCACTGCGTGCGGGGCTCGACGTCGCCTACGCGTTTGGTGACTTCACCGTGGCCGGGCAATATACCCACCGCTGGGCCATGACCAGGCCCGGGTTCGAGGAGCTGCGGCGCGATGCGGTGGACCTCGTCGACGCCGAGTTGCGGTACCGGTTGACACCCGAGGTCAAGCTGAAGCTCTACGTGCGCAACCTGTTCAACAAGCTCTATTACGCCACTGCCGACGAGCTGTCCGCATTCGCGCCTGAGCGCACGGTGGGCCTCAACGTGGTGTGGGCCATGGAGTGA
PROTEIN sequence
Length: 663
MPGQVARRAFGTVVAALSFGAVPGLATAVTETTELRITQDAAGAERRGGDRRGEAAAGDVEVWHGEPVKVTARGTVADWPEALAIDTMNYDLAIAEPADFQDWITRLPGVGATGQSGLFETFSIRGSGGNGILILTAGVPVAAQRRAGVPVSFVEPVLLGDVSVTRGPSVVHFGPGALGGAVSMEPRWFKAPFVTAGYASGGDEFLLATGTGGEGFSLAAARHRAGDSKAPNGTPLNTSYARDSATLQLQHRFGAMNVDALLMPSRTRGIGKSNSRYPDSQVTDYPRDDHTIGRLRLQHDRGFEASVYAHDQELTTFKRTPRKANAYASIASTDGGGTVQQSWRRGAFKNNVGVEYFGRRDVTGYDASGTPGDRTYSLDGASEDSWSLFGITDWRLAGAFSLELGARTTWIAQHQSGATSRDSDAAVTAAAVWTPDESSRWSLNLASGYRFASLEERFFSGVTGRGEIVGNPDLGSEHSLGVDLGHAWWHGDWSTQAHVWRTNVRDLIQKVTLSPDVEGYVNVGKAKLYGAEAVVGWTPLDSGWSLHANAAVVRGEDRDSGQPVYGIPPLRAGLDVAYAFGDFTVAGQYTHRWAMTRPGFEELRRDAVDLVDAELRYRLTPEVKLKLYVRNLFNKLYYATADELSAFAPERTVGLNVVWAME*