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scnpilot_solids1_trim150_scaffold_186_28

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 31743..33014

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 419.0
  • Bit_score: 706
  • Evalue 2.10e-200
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 419.0
  • Bit_score: 703
  • Evalue 5.30e-200
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 419.0
  • Bit_score: 706
  • Evalue 1.50e-200

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGAGTGATGCCATGACTGCCGTTGCGCCATCCGAACCACGGGCGGCCGTGCCGTGCCCGCGCCGCGCCAGCGTGGGCGTGCGCGTGGGCAAGGTGCTGGTGGGCGGCGGCGCGCCGGTGGTGGTGCAGTCGATGACCAACACCGATACCGAGGACGCCGCCGCCACCGCGAAGCAGGTGGCCGAGCTGGCCCGTGCTGGTTCCGAGCTGGTGCGCATCACGGTCAATACCCCGTCCGCGGCCGCCGCGGTGCCGCACATTTTCGAGCGTCTGGACATGATGGGCGTGGCCGTGCCGGTGGTCGGCGATTTCCACTACAACGGCCACCAGCTGCTGGCGCAGGAGCCGGCGTGCGCGCGGCTGCTGGCCAAGTACCGGATCAATCCGGGCAACGTCGGCTTCGGGGCGAAGCATGACAGCCAGTTCGCGAAGATCATCGAGATCGCGCTGCGCGAGGACAAGCCGGTGCGCATCGGCGCCAACTGGGGCTCGCTCGACCAGGCGCTGCTGACCACCCTGATGGACGAGAACGCCCGGCGCGCCGAGCCGTGGGATGCCGGCGCCGTGGCGCGCGAGGCGCTGCTGCGCTCGGCGCTGGATTCGGCGGCCTATGCCGAGACCCTGGGCATGGCGCGTGACCGCATCATCCTGTCGTGCAAGGTCTCAGGGGTGCAGGAGCTGATCGCGGTCTACCGCGACCTCGCCGCGCGCTGCGACTACGCCCTGCACCTGGGCCTGACCGAGGCGGGCATGGGCTCGAAGGGCATCGTCGCCTCGACGGCTGCGCTCGCCGTGCTGCTGCAGGAGGGCATTGGTGACACCATCCGCATCTCGCTCACGCCAGAACCTGGCGCGCCCCGTACCGGCGAGGTGATCGTCGCCCAGGAGTTGCTGCAGACCATGGGCCTGCGCGCGTTCTCGCCGCTGGTCACCGCCTGTCCGGGCTGTGGCCGCACCACCAGCGAATTCTTCCAGGTGCTGGCGAAGACCGTGCAGGAGCACGTGCGCGAGCAGATGCCGCTGTGGCGCGTGCAGTACGACGGCGTGGAAAACCTCACCCTGGCGGTGATGGGCTGCGTGGTGAACGGGCCGGGCGAATCCAAGCACGCGAACATCGGCATTTCCCTGCCGGGCAACGGCGAGACGCCGGTGGCGCCGGTGTTCATCGACGGCAGGAAGGCCATGACCCTGCGCGGCGAGCGCATTGCCGAGGAGTTCGTCGGCATCCTGGACGATTATGTGGCCCGCAAGTTTGCCGCGCGGGCCGGCTGA
PROTEIN sequence
Length: 424
MSDAMTAVAPSEPRAAVPCPRRASVGVRVGKVLVGGGAPVVVQSMTNTDTEDAAATAKQVAELARAGSELVRITVNTPSAAAAVPHIFERLDMMGVAVPVVGDFHYNGHQLLAQEPACARLLAKYRINPGNVGFGAKHDSQFAKIIEIALREDKPVRIGANWGSLDQALLTTLMDENARRAEPWDAGAVAREALLRSALDSAAYAETLGMARDRIILSCKVSGVQELIAVYRDLAARCDYALHLGLTEAGMGSKGIVASTAALAVLLQEGIGDTIRISLTPEPGAPRTGEVIVAQELLQTMGLRAFSPLVTACPGCGRTTSEFFQVLAKTVQEHVREQMPLWRVQYDGVENLTLAVMGCVVNGPGESKHANIGISLPGNGETPVAPVFIDGRKAMTLRGERIAEEFVGILDDYVARKFAARAG*