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scnpilot_solids1_trim150_scaffold_505_20

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(21539..22195)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3S2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 194.0
  • Bit_score: 300
  • Evalue 1.70e-78
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL94113.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 194.0
  • Bit_score: 300
  • Evalue 2.40e-78
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 220.0
  • Bit_score: 297
  • Evalue 4.50e-78

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCCGTGCAGCTTGACCCAGACCGGCAGCATGGTCTTTGATGACGCACCGTCATGCCGGGTGAGCAACCCGCATATGCCCGCCGAGTCCAGCACCGCCAGTGAAACACCCAGCCAGCGCCGGACGGCGTGGATGGTTGCGGCCCAGGCCGGCGACCGCCGTGCCTACGAAAAGCTGCTGGCCGATTCGATCAGCCTGATCCGTGCCGTCGCGCGGCGCTGCGGCGTGGCACCGGATCATGTCGATGACGTGGTACAGGAAACACTGCTCACCGTGCACCGCGTGCGCCATACGTTTGATCCGGCGCGTACCTACGACAACTGGCTTGCCGCGCTCGCGAACCGTCGCGCGATCGACGCCTTGCGCAGCCGCGGCCGCCGCGACCGTCGCGAGGTGCACGACGAGTTTGCGCTTGAGCGCCATGCCGACAGTGGTGACGCCAGCGCCGCCGCCGAGCGCGAGCAACGTGCGCGGCGCCTGCGCCTGGCCGTCGCCGAGCTGCCGCCTGGCCAGCGCGAGGCGGTGGAGCAACTTGGCCTGCGCGAGCGCTCGCTGCGCGACGTCGCCACGTCGACCGGGCGCCGCACCGGAGCGCTGAAGGTCAACCTGCATCGGGCACTGAAGACGTTGCGCGAGCGCTTCCATGGAGAATCCTGA
PROTEIN sequence
Length: 219
MPCSLTQTGSMVFDDAPSCRVSNPHMPAESSTASETPSQRRTAWMVAAQAGDRRAYEKLLADSISLIRAVARRCGVAPDHVDDVVQETLLTVHRVRHTFDPARTYDNWLAALANRRAIDALRSRGRRDRREVHDEFALERHADSGDASAAAEREQRARRLRLAVAELPPGQREAVEQLGLRERSLRDVATSTGRRTGALKVNLHRALKTLRERFHGES*