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scnpilot_solids1_trim150_scaffold_3214_5

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(2488..3123)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIM02695.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIM02695.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 211.0
  • Bit_score: 302
  • Evalue 3.60e-79
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 211.0
  • Bit_score: 302
  • Evalue 2.50e-79
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 196.0
  • Bit_score: 290
  • Evalue 5.30e-76

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGAGTCGAAGCATGCCGCCGATGGCGATACGGACGGGAACACCGTGAACGCGGCAGTTGGCGCCCTGACCGCGGCGCCACTCGAAGGCGCCGTCGAGCGGGTATCGGCAACCTCGCTGAACGCGTTCCTGGCCCAGATCGAGCACCGTGCCTTCCGCCTGGCCGAAATGCAGCTGCGCCAGCGCGAGGACGCGATGGATGCGGTACAGGACGCCATGTTGCGCCTGGCCCAGCACTACCGGGACAAGCCGCCGGAAGAATGGGCGCCGTTGTTCTGGGGCATCCTGCGCCGGCGCATCGTCGACCTGCAGCGCCGGCGCAAGGTGCGCTCGATCGTCGTCGGCTGGCTTGGCGGCGGGCAGGATGGCAATGGCGACGAACTCCCGGTGTGGGATCCGGCCGACCAGGGCCCCGGGCCGCTGGACCAGCTTGGCGACGCCCAGGCCTACGCCGCGATGAGCGTCGCGGTGCGCAAGCTGCCGCGACGCCAGCGCGAGGCGTTCATGTTCCGCATCCTGGAGGGGCTGGACGTGGCCGACACGGCGCGCGCCATGCACTGCTCCCAGGGCAGCGTCAAAACGCATCTGTCGCGCGCCATGCAACACCTGCGCGATCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 212
MESKHAADGDTDGNTVNAAVGALTAAPLEGAVERVSATSLNAFLAQIEHRAFRLAEMQLRQREDAMDAVQDAMLRLAQHYRDKPPEEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLGGGQDGNGDELPVWDPADQGPGPLDQLGDAQAYAAMSVAVRKLPRRQREAFMFRILEGLDVADTARAMHCSQGSVKTHLSRAMQHLRDQLEDWR*