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scnpilot_solids1_trim150_scaffold_2949_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12

partial RP 35 / 55 MC: 1 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 1220..4756

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003494D80 similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 999.99
  • Bit_score: 1681
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EIL91718.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 999.99
  • Bit_score: 1678
  • Evalue 0.0
type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 999.99
  • Bit_score: 1367
  • Evalue 0.0

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3537
ATGCAGAAAATCCTTGGCTTGTGCAAATCCGGATGGTTCATGGCCTTGATCGGCGTGCTGCTGCTGTCGATCCTGGTGTGGGTGGGCGGTCCCTGGCTCGGCATCGGCGACAGCCAGCCGCTGGCCAGTCCGGTCGTGCGGCTGGTGGTGATCGTCATCATCGTCGCGATCTGGGCCATCTGCCTGCAGGTGTCGCAACTGCGCGCGCGCAAGAAGGCCAACCAGTTGTCGGGCGACGTCGCCGTGCAACCGACGCAGGCCACCGGCGACCACGACGAGCGCAGTGAAGACGAGCGCGCGCAATTGCAAAATCGTTTCCGCGAGGCGGTCGATACCTTGCGCAAGCGCCGGCACGGCGGCGGTAACCTGTACACCCTGCCGTGGTACGTGGTGATCGGGCCGCCGGGTTCGGGCAAAAGCACGCTGGTGCAGAACTCGGGCTTGCATTTCCCGTTGTCGGAACGCTTCGGCAAGGATGCGCTGCGCGGCATCGGCGGCACCCGCAATTGCGATTGGTGGTTCACCGACGAGGCTGTGTTCCTCGATACCGCCGGTCGTTACACCACCCAGGATTCCGACCGCTCCGCCGACGCCGGCGCGTGGGCCGAATTCCTGAAGCTGTTGCGCAAGTACCGCAAGCGCCGCCCCATCAACGGCGTGATGGTGGCGATGAGCGTGTCCGACCTGCTGATGCTGGACGCGGCGGGGCTGAAGGCGCACATCGCCGCGGTGCGGCGGCGCCTCGATGAACTCGGCGAGCAATTGCGGATCGGCGTGCCGGTGTACCTGGTGCTGACCAAGTGCGATCTCGTCGCCGGGTTCGGCGAGTTCTTCGACAACCTCGATGCGGAGCAACGCAACCAGGTCTGGGGCGCGTCGTTTCCGGTCGCGCAAACCATGGATGGCAGCGCGGCGGCGGCGTTCGCCGGCGAATTCGACCTGCTGACCGACCAGCTCAACGCGCGCGTGCTCGACCGGCTGTACGAGGAGCGCGACCGCAACCGGCGTGCGGCGATCCTGTCGTTCCCGTTGCAGATGGGTTCGCTGCGCGAGATCGTGCGGCAGTTCGTGGAAGGCGTGTTCAGCGGCCACCAATACGGCACGCCGCCGTTGCTGCGCGGCGTGTACCTGACTTCCGGCACCCAGGAGGGCACGCCGATCGACCGCATGCTGGGCGCGGTGGCGCGCACCTTCGGGCTCGATCCGGCACGGGTGCAGCCGTCCAGCGCGAAGCAGCGCACCTTCTTCGTGGAGCGCCTGCTGAAAGACGTGCTGTTCCGCGAATCGGGATTCGCCGGCACCGACCCGAAACTGGAACGCCGCAAGATCCTGCTGCAGGCCGCGGCATACGGCGGCGCATTGCTGCTGACGGTGCTGCTGCTCGCGGGCCTGTTCACCAGCTACGGGCGCAACCGCGCCTATCTTGCGCAAGTGCAACAGGCGATCGCGCAATATCCGGCCAAGGCGGACATCACCGGCGCCAGCGACGACAAGACGTATTTCGCGCAGGCGCTGCAACGGCTGGACGCGATGGACTCGGTCGAGTCGGTGGCGCGGGAATACCAAGGCAACGTGCCATGGCTGATGCGCTTCGGTCTGTATCAGGGCAATGCCGTCGGTGAGGAAGTGCATGGCGCGTACTTGCGCGAACTCAATGCGCTGCTGCTGCCGGGCGTGGCGATGCGTTTCCGCAACGGCCTTGCCGCGAGCGCCAGCGATCCGCAGGCGCTGTATTACTACCTGAAGGGCTACCTGATGCTGGGCGAGCCCGCGCACCGCGATGCCGATCAACTGGTGGCATTGACCAATATCGAATGGAACCGGATCTTCCCCGCCGACACGGTCTTGCAGCAGGCGCTCGCGAAACAGTTCGCGGTGCTGATCGCCGATCCGAAAAAACTGCGGGCGATCCCCCTGGACAACGATCTGTTGGCGCAGGCGCGCAGCACGCTGCAAACCGCGGACCTCGCGACGTTGGTATACGGCAACCTCAAGTTGCAGGAAGCGGCGTCTGACGATCCCTCGTTGCACCTGGACAAGGAACTGGGCCTGCTTGGCAACGTGTTCCGCCGCAACAGCGGCGCGCCATTGTCGCAACCCTTGCCAGCGCTTTACACGCAACCGGTGTTCCTGCATGAGGTGGACAAGGGCATCGCGGAAGCCGTGCAACAGTTCGCCAAGGACGACTGGGTGTTCGGCGCCGGCAAGATGGATTCGCTGGCGCAGGCGCGCATGCAGCAGCAGGTATTGGCGCTGTACGAACAGGATTACATCAAGCAATGGGACGGCCTGCTCGACGACCTCGCGCTGCAACCCATCTCGAACATCCAGGATGCCAGTGCGATCGCGGCCAAATTGGCGGGCCCCAGTTCGCCGTTGAAGGCACTGCTCAAGCTGGTCGCCGACAACACCAGCGACATGCTGCGCGCGCCGGCCGAATCGGGCGGCGAGAAAGCCGCGGCGGGCGTGGAAAAGCTGGCCGCGCAGAAAGCGAAGCAGAAGGCCACCCAGAATGCGCTGTCCCGGGTGCTGGCCGGTGCCGCGGCCGGTGGCGAGGCTGCCGCGCCCGCGGCCAAACCCGGCGATGCGATCAGCGCGCATTTCGACGCCCTCGACAAACTGACCGCGGGCGCGCCGGGCGCAGCACCCATCGACCAGACCCTGGCCTCGATCGAGCAACTCAGCAAGACGCTGCTGACCATGACCGATTTCGGCGATTCCGCGGGCCAACCGAATCCGCAACTGCTGCTGGCGCAACAGCAGGTCTCGCAATTGCCGCCGCCCGTTTCCGGATGGCTGGCTGCACTGACCGGCAAGAGCCAGGCGCTGGTCGCCAGCGGCACCCAAAGTGCGTTGGGCGATCAGTTCAAGCAGGCGGTGGGCAAGGATTGCGCGGCGTTCACGCGTGGGCGCTTTCCATTCGATGCGTCCGGCCGCAGCGATATTCCGCTGCAGAACTTCGCCGGCCTGTTCGGCTACGGCGGCAGTTTCGACGCGTATTACAAGCAGACCCTCGCCAAGCTGGTCGATGCCAGCGGCCCGGTCTGGAAGTGGAAGACGGGGCCGGGTGCGGTCGCCGGACCGCCGGGCATGCTGGCCCAGATGCAGCTCGCCGACGAGATCAAGCAGATGTATTTCCACAACGGCGCCAACGAGCCCGAAGTGGACTTCAGCATCACCCAGCCGCAGCTCGGCGACGGCATCGACAAGCTCGAGATTGCCATCGACGGCCAGACCTTCACCTACACGCCGGGCTCCGCCGGTCGCATGGCCATGAAGTGGCCAGGGCCGAAACCGGGGCTGGTGACGGTTTCGGCGTGGGACGCCGCCGGCAACCTGCTCAGCACCTTCAGCTACCAGGGCGACTGGGCTTTCTTCCACGCGCTGGACGCGGCGCGTCTGCAGAAGCAATCGGACCTGCGTTACCTCGCCACGTTCGACTTCGGCGGGCATGTCGCGAAAGTCGTGATCCTCGCCGGCAGCCTGAAGAACCCGTTCCTCAACCAGGCGGTTCACCGTTTCCGCTGCGGAGGCTGA
PROTEIN sequence
Length: 1179
MQKILGLCKSGWFMALIGVLLLSILVWVGGPWLGIGDSQPLASPVVRLVVIVIIVAIWAICLQVSQLRARKKANQLSGDVAVQPTQATGDHDERSEDERAQLQNRFREAVDTLRKRRHGGGNLYTLPWYVVIGPPGSGKSTLVQNSGLHFPLSERFGKDALRGIGGTRNCDWWFTDEAVFLDTAGRYTTQDSDRSADAGAWAEFLKLLRKYRKRRPINGVMVAMSVSDLLMLDAAGLKAHIAAVRRRLDELGEQLRIGVPVYLVLTKCDLVAGFGEFFDNLDAEQRNQVWGASFPVAQTMDGSAAAAFAGEFDLLTDQLNARVLDRLYEERDRNRRAAILSFPLQMGSLREIVRQFVEGVFSGHQYGTPPLLRGVYLTSGTQEGTPIDRMLGAVARTFGLDPARVQPSSAKQRTFFVERLLKDVLFRESGFAGTDPKLERRKILLQAAAYGGALLLTVLLLAGLFTSYGRNRAYLAQVQQAIAQYPAKADITGASDDKTYFAQALQRLDAMDSVESVAREYQGNVPWLMRFGLYQGNAVGEEVHGAYLRELNALLLPGVAMRFRNGLAASASDPQALYYYLKGYLMLGEPAHRDADQLVALTNIEWNRIFPADTVLQQALAKQFAVLIADPKKLRAIPLDNDLLAQARSTLQTADLATLVYGNLKLQEAASDDPSLHLDKELGLLGNVFRRNSGAPLSQPLPALYTQPVFLHEVDKGIAEAVQQFAKDDWVFGAGKMDSLAQARMQQQVLALYEQDYIKQWDGLLDDLALQPISNIQDASAIAAKLAGPSSPLKALLKLVADNTSDMLRAPAESGGEKAAAGVEKLAAQKAKQKATQNALSRVLAGAAAGGEAAAPAAKPGDAISAHFDALDKLTAGAPGAAPIDQTLASIEQLSKTLLTMTDFGDSAGQPNPQLLLAQQQVSQLPPPVSGWLAALTGKSQALVASGTQSALGDQFKQAVGKDCAAFTRGRFPFDASGRSDIPLQNFAGLFGYGGSFDAYYKQTLAKLVDASGPVWKWKTGPGAVAGPPGMLAQMQLADEIKQMYFHNGANEPEVDFSITQPQLGDGIDKLEIAIDGQTFTYTPGSAGRMAMKWPGPKPGLVTVSAWDAAGNLLSTFSYQGDWAFFHALDAARLQKQSDLRYLATFDFGGHVAKVVILAGSLKNPFLNQAVHRFRCGG*