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scnpilot_solids1_trim150_scaffold_5833_2

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 766..1419

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6FD4D similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 212.0
  • Bit_score: 301
  • Evalue 5.80e-79
  • rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 219.0
  • Bit_score: 337
  • Evalue 1.00e-89
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 208.0
  • Bit_score: 284
  • Evalue 2.30e-74

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCCGAACACACCATCAAGGCCACCGGCCGCAACGTCGAGGGTAAGGGTGCGAGCCGCCGCCTGCGTCGTGCCGCCCAGCTGCCGGCCATCGTCTACGGCGGCAGCGCCGCCCCGCAGGCCATCCAGATCGAGCATGAGGCGATCTGGCTGGCCAGCCACCACGAGTGGTTCTACTCGTCGATCCTGAGCCTGGACATCGACGGCAAGGTCGAGCAGGTGCTCCTGCGCGACATGCAGCGCCATCCGTACAAGCAGCTGATCATGCACCTGGACTTCCAGCGCGTGGACGCCAGCCAGGCGCTGCGCACCAAGGTCCAGCTGCACTTCCTGAACCAGGAGAAGTCCCCGGCCGGCAAGACCGGTGGCGTGGTGATCATGCACGAGCTGACCGAAGTCGAAGTGGCCTGCCTGCCGAAGGACCTGCCGGAAGCCATCGAAGTCGACCTCGGCGACCTCGCCGTGGGTGCGGTGGTGCACCTGTCCGACCTCAAGCTGCCGGCCGGCGTGGAAATCCCGGCCCTGAAGCTGGGCAAGGAGCACGACGTCGCCGTCGTGGTCGCCAAGCACGGCAAGGAAGAAGTGGAAGAAGTCGCTGCGCCGGAAGCCGCCGAAGTGCCGGCGACCAAGGCTGCCAAGAAGGAAGACAAGTAA
PROTEIN sequence
Length: 218
MSEHTIKATGRNVEGKGASRRLRRAAQLPAIVYGGSAAPQAIQIEHEAIWLASHHEWFYSSILSLDIDGKVEQVLLRDMQRHPYKQLIMHLDFQRVDASQALRTKVQLHFLNQEKSPAGKTGGVVIMHELTEVEVACLPKDLPEAIEVDLGDLAVGAVVHLSDLKLPAGVEIPALKLGKEHDVAVVVAKHGKEEVEEVAAPEAAEVPATKAAKKEDK*