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scnpilot_solids1_trim150_scaffold_31046_1

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 2..1285

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 425.0
  • Bit_score: 797
  • Evalue 9.30e-228
rpoB; DNA-directed RNA polymerase, beta subunit protein (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 426.0
  • Bit_score: 778
  • Evalue 1.30e-222
DNA-directed RNA polymerase subunit beta n=1 Tax=Xanthomonas sacchari RepID=UPI000262A804 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 426.0
  • Bit_score: 780
  • Evalue 8.40e-223

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ACGCACAAGTCCGACATCCTCGACGTGATGAAGGTGCTGTGCGAGATCCGCAATGGCCGCGGCGTGGTGGACGACATCGACCATCTGGGCAACCGTCGCGTGCGCTCGGTCGGTGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTCGAGCGCGCGGTGAAGGAGCGCCTGTCGATGGCCGAGTCCGAAGGCCTGACCCCGCAGGAGCTGATCAACGCCAAGCCGGTGGCGGCCGCGATCAAGGAGTTCTTCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACCCACAAGCGCCGCGTCTCGGCGCTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGGTGTTCGCCCGCACCAACCGCTACGGCTTCCTCGAGACGCCGTACCGCAAGGTCGTGGACGGCCGCGTCACCGACGAGATCGAGTTCCTGTCGGCGATCGAGGAAAACGAGTACGTCATCGCCCAGGCCAACGCGCCGCGCGACGAGAAGGGCAACATCTCCGCGCAGTTCGTGGCGTGCCGCTTCCAGGGTGAAAACCTGCTGAAGCCGCCGAGCGAGATCCACTTCATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCGGCCGCGCTGGTGCCGTTCCTCGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGCAGCGCCAGGCCGTGCCGACCCTGCGTGCGCAGAAGCCGCTGGTGGGTACCGGCATCGAGCGTGCGCTGGCCCGCGACTCGGGCGTGACCGTGAACGCCCGCCGTGGCGGCGTGGTCGAGCAGATCGACGCCGGCCGCATCGTCGTCAAGGCGCACGAGTCGGAAATCTCCGGCGAGCACGATGCCGGCGTGGACATCTACTCCCTGGTCAAGTACACCCGCAGCAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAACGTGGGCGACGTGGTGGCGCGCGGCGACGTGCTGGCCGACGGCCCGTCCACCGACATCGGCGAGCTGGCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGCTCTCCGAGCGCGTGGTCGAGGAGGATCGCTACACCACGATCCACATCGAAGAGCTGACAGTGCAGGCACGCGACACCAAGCTGGGA
PROTEIN sequence
Length: 428
THKSDILDVMKVLCEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNRYGFLETPYRKVVDGRVTDEIEFLSAIEENEYVIAQANAPRDEKGNISAQFVACRFQGENLLKPPSEIHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERALARDSGVTVNARRGGVVEQIDAGRIVVKAHESEISGEHDAGVDIYSLVKYTRSNQNTCINQRPLVNVGDVVARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTVQARDTKLG