ggKbase home page

scnpilot_solids1_trim150_scaffold_30590_2

Organism: SCNPILOT_SOLID_1_TRIM150_Lysobacter_69_7

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(255..1298)

Top 3 Functional Annotations

Value Algorithm Source
multidrug RND transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030C0F1A similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 346.0
  • Bit_score: 458
  • Evalue 4.50e-126
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 351.0
  • Bit_score: 458
  • Evalue 1.40e-126
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV26840.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 351.0
  • Bit_score: 458
  • Evalue 6.40e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
GCGGTGCTGACCCTGAAATTCGACTGGCCGCTGGACGTATGGGGCGGCAAGCGCGCCGACTACCTTGCGGCGCTGGGCCAGGCCCGCGCCAGCGAAGTCGACGCGCAGGCCGCGCGGCTGTCGCTGGCGGCCAACGTGGCGCGCAGCTACGTCGCGCTGGCGCAGGCGTTCGATGATCTCGACCTGGCCCGCCGCGAGCAGGCGCGCACCGGCGACCTGGTGGCGCTGGGCAAGCAGCGCATCGCCGCCGGATTGGACAACGATGCCGCCCTGCGCGGCAATGAGGCCCTGGCCGCCACCGCCACGGCACAGGCGGACGCCGCGCAGCACCGCATCGATGCGCTGCGCAACGCGCTGGCCGCGCTGCTGGGGCAAGGCCCCGATCGCGGCTTGGCGATCCAGCGCCCGCACCTGCTCGAGACTCCGGCCCCGGCGCTGCCGTCGGTGCTGCCCAGCGAACTGCTGGGGCATCGCCCGGACGTCGTCGCGGCGCGCTGGCGGGTGGAAGCGGCCGCGCAGGACATCACTTCCGCGAAGGCACGGTTCCGACCCAGCATCGACCTGAGCGGCCTGGTCGGGCTTGCCGCCACCGGCTTCAAGGGCCTGTTCGACAGCGACGCCTTCCTCGGCTTCGGCGGTCCCGCGCTGAGCCTGCCGATCTTCGACGGCGGCCAACTGCGCAGCAACCTGGCCGCGCGCGATGCCGATTACGACCTCGCCGTGGCGGAGTACAACCGGACCGTCGTCGAAGGCCTGCGCCAGGTCACCGACGCGGTGCAGGCCATACGCGCGCTGGACGCCCAGGCGGCCGCGCTGGAACAGGCCCGAAGCGCCGCCGCCGCCGCCGCGCAGGTGGTCGAGCAGCGCCAGCGCGCCGGTCTGGCCAACCGGCTCGACCTGCTGGCGGCACGCAAGCCGCTGCTGCAGGCGGAGCAACAGCTGGCGGCCGTACGCAGCCAGCGCTACGCCGCGGCCATCGACCTCGACCAGGCGCTGGGCGGCGGCATCGCCGCCACCGCGCCCACTCCCATCGCCTCCCACTGA
PROTEIN sequence
Length: 348
AVLTLKFDWPLDVWGGKRADYLAALGQARASEVDAQAARLSLAANVARSYVALAQAFDDLDLARREQARTGDLVALGKQRIAAGLDNDAALRGNEALAATATAQADAAQHRIDALRNALAALLGQGPDRGLAIQRPHLLETPAPALPSVLPSELLGHRPDVVAARWRVEAAAQDITSAKARFRPSIDLSGLVGLAATGFKGLFDSDAFLGFGGPALSLPIFDGGQLRSNLAARDADYDLAVAEYNRTVVEGLRQVTDAVQAIRALDAQAAALEQARSAAAAAAQVVEQRQRAGLANRLDLLAARKPLLQAEQQLAAVRSQRYAAAIDLDQALGGGIAATAPTPIASH*