ggKbase home page

scnpilot_solids1_trim150_scaffold_8448_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 1571..2956

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 461.0
  • Bit_score: 861
  • Evalue 3.10e-247
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 461.0
  • Bit_score: 861
  • Evalue 4.30e-247
DNA repair protein RadA similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 461.0
  • Bit_score: 826
  • Evalue 5.90e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGGCCAAAGCCAGGACCGCCTACGTCTGCACCGAATGCGGCGCCGAGCACAGCAAGTGGCAGGGACAGTGCGTCGAGTGCGGGGTGTGGAACACGCTCAGCGCGATCGTGCTGGAGCCGGCCACGGCGGGCAAGGCGTCGGCAGGTGCACAGCGTTCCAGCTATGCCGGCGCCGCTGCGGGCGCGCCGAAGATCACGCCGCTTACCGAAGTGATGCTGACCGCCGACGCGCGCACGCTGACCGGCATCGGCGAGCTGGACCGCGTGCTGGGCGGCGGTCTGGTGCAGGGTTCGGTGGTGCTGATCGGCGGCGATCCGGGCATCGGCAAGTCGACCCTGCTGTTGCAGGTGCTTGGCACGCTGGGTCTGCAGCTGCCCAGCGTCTACGTCACCGGCGAGGAGTCGCTTTCGCAGGTGGCCGCGCGTGCGCAGCGCCTGGGCCTGGCGCTGGAGCCGCTGCAGGCGCTGGCCGAGACCTGCATCGAACGGATTCTCGAACAGGCCATGGCCACGCGGCCGAAGGTGCTGGTGATCGACTCGATCCAGACCATCTGGACGGAATTGCTGGCCGCCGCGCCCGGTTCGGTGTCGCAGGTGCGCGAGTCGGCCGCCAAGCTCACCCGCTTCGCCAAGGAGACCGGCACGGCGGTGTTCCTGGTCGGCCACGTGACCAAGGAGGGCGGCATCGCCGGCCCGCGCGTGCTCGAGCACATGGTCGATGCGGTGCTGTATTTCGAGGGCGAATCGGGCAGCCGTTTTCGCGTGTTGCGCGCGTTCAAGAACCGCTTCGGCGCGGTCAACGAACTGGGCGTGTTCGCGATGAGCGACAAGGGCCTGCGCGAGGTGCCGAATCCGTCGGCGATCTTCCTTTCCTCGCACAGCACTCCGACATCAGGCAGCGCGGTGATGGTGACCCGCGAGGGCACGCGCCCCTTGCTGGTCGAGGTGCAGGCACTGGTCGACCAGTCCTCGCTGGGCAACCCGCGCCGGGTCACCCTGGGCCTGGAGCAGAACCGGCTCGCCATGCTGCTTGCCGTGCTGCATCGGCATGGCGGCGTGGCAGCTTACGACCAGGACGTGTTCGTCAACGTGGTCGGCGGTATCCGCGTGCAGGAAACCGCGGCCGATCTGCCGGTGCTGCTGGCGGTGCTGTCCAGCCTGCGCGATCGCCCGCTGCCGGAGCACATGGTCACCTTCGGCGAAGTGGGCCTGTCCGGCGAGATCCGTCCGGTGCCCAATGGCGAGGAGCGGCTCAAGGAAGCGGCCCATCACGGCTTCCGCCGCGCGATCGTGCCCAAGGCGAATGCTCCGAAGAAGGGCAGGGTCGGCGAGATGGAAGTGATCGGTGTGGAGCGGCTGGGAGAGGCGATCGACGCCTGCCGCTAG
PROTEIN sequence
Length: 462
MAKARTAYVCTECGAEHSKWQGQCVECGVWNTLSAIVLEPATAGKASAGAQRSSYAGAAAGAPKITPLTEVMLTADARTLTGIGELDRVLGGGLVQGSVVLIGGDPGIGKSTLLLQVLGTLGLQLPSVYVTGEESLSQVAARAQRLGLALEPLQALAETCIERILEQAMATRPKVLVIDSIQTIWTELLAAAPGSVSQVRESAAKLTRFAKETGTAVFLVGHVTKEGGIAGPRVLEHMVDAVLYFEGESGSRFRVLRAFKNRFGAVNELGVFAMSDKGLREVPNPSAIFLSSHSTPTSGSAVMVTREGTRPLLVEVQALVDQSSLGNPRRVTLGLEQNRLAMLLAVLHRHGGVAAYDQDVFVNVVGGIRVQETAADLPVLLAVLSSLRDRPLPEHMVTFGEVGLSGEIRPVPNGEERLKEAAHHGFRRAIVPKANAPKKGRVGEMEVIGVERLGEAIDACR*