ggKbase home page

scnpilot_solids1_trim150_scaffold_8200_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(852..1274)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal body rod protein FlgC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRY3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 238
  • Evalue 3.00e-60
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 238
  • Evalue 4.20e-60
flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 235
  • Evalue 8.00e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGTCGATGTTCTCCATCTTCAACGTGGCCGGCTCCGGCATGGCCGCGCAGTCGACCCGCCTCAACACGGTGGCCAGCAACCTGGCCAACGCCGACAGCGTGGCCAGTTCGCCGGAAGCCGCCTACCGCTCGCGCGAGCCGCTGTTCGCCACCATCCGCAGCCAGCAGGGCGCCGGCGACGCGGGCGCGACCGGCGAAGGCGTGCAGGTGCTCGGCGTCACCGAAAGCCAGGCGGCGATCCCCAGCCGCTACGAACCGGGCAACCCGCTGGCCGATGCCGACGGCTACGTCTACGCCAGCAACGTCAACCCGGTCGACGAGTTGGTCAACATGATCTCGGCCTCGCGCTCGTACCAGAACAACGTCGAGGTGATGAACTCGGCGCGCCAGCTGCTGCAGAAAACGCTGGACCTCGGCAAGTGA
PROTEIN sequence
Length: 141
MSMFSIFNVAGSGMAAQSTRLNTVASNLANADSVASSPEAAYRSREPLFATIRSQQGAGDAGATGEGVQVLGVTESQAAIPSRYEPGNPLADADGYVYASNVNPVDELVNMISASRSYQNNVEVMNSARQLLQKTLDLGK*