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scnpilot_solids1_trim150_scaffold_6922_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(1922..2242)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein H-NS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 3.80e-47
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90130.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 107.0
  • Bit_score: 195
  • Evalue 5.30e-47
DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 107.0
  • Bit_score: 190
  • Evalue 2.20e-46

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGGCCGTCGATATCAAGAATCTCAACCACAATCAGCTCAACGATCTCATCAGCAAGGCACAAATCCGTCAGGACGAATTGCGCAAGGAGAAGGTCGTCAAGCTGCGCGAGAAGGTCCACGCGCTGATCAAGGCCGAGGGTTATTCGTTCGAGGACATTTTCGGCGGTGCCCGCAAGAGCAAGCGCGCCGGCGCCAAGGTTGCCCCGAAGTATCGCAACCCGGCCAACCCGGCGCAGACCTGGTCCGGCCGCGGCAAGCGTCCGCACTGGTTCAACGACGCGCTGAAGGCGGGCAAGAAGGAAAAGGACCTGACGATCTGA
PROTEIN sequence
Length: 107
MAVDIKNLNHNQLNDLISKAQIRQDELRKEKVVKLREKVHALIKAEGYSFEDIFGGARKSKRAGAKVAPKYRNPANPAQTWSGRGKRPHWFNDALKAGKKEKDLTI*