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scnpilot_solids1_trim150_scaffold_17789_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 2..580

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 189.0
  • Bit_score: 327
  • Evalue 6.70e-87
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 189.0
  • Bit_score: 327
  • Evalue 9.40e-87
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 309
  • Evalue 1.00e-81

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
TTCCGCGTCGCGCGCGCGGTGATCGGCGACGACTCGGAAGCGGAAGACGTGCTGCAGGAATCGTATATGCGTGCCTATCACAAGCTGGATTCGTTCCGTGGCGAGGCGACCCTGTCGACCTGGCTGACCACGATCGTGCTCAACGAGGCCCGTGGCCGCCTGCGCAAGCGCCACACCATGGTCGGGCTGGAACAGGTGGACGCCGCACCCGACGACACGCACCAGATCATCCGCTTCCCCTCGGCCTTCGGCAGCGAGGACCCCGCCGCCTCCGCCGCGCGCGCGCAGATCCGCCACCTGCTCGAGCACGCCATCGACGAACTGCCGCCGGCTTTCCGCGTGGTGTACATGCTGCGCGAGGTCGAGGAATGCAGCGTGGAGGAAACCGCCAGCCAGCTCGGCATCAAGCCGGAGACGGTGAAAACCCGCCTGCATCGCGCCCGCCGCCAGCTGCGCGCCGCGTTGCACGACAAGCTCGCCACCACCGTCGGCGAGGCTTTCGCCTTCATGGGTCGACGCTGCGCCCGCGTCACCGACGCGGTGATGGCGCGGCTGGACGCCGAGACGGGCGAGGCCTGA
PROTEIN sequence
Length: 193
FRVARAVIGDDSEAEDVLQESYMRAYHKLDSFRGEATLSTWLTTIVLNEARGRLRKRHTMVGLEQVDAAPDDTHQIIRFPSAFGSEDPAASAARAQIRHLLEHAIDELPPAFRVVYMLREVEECSVEETASQLGIKPETVKTRLHRARRQLRAALHDKLATTVGEAFAFMGRRCARVTDAVMARLDAETGEA*