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scnpilot_solids1_trim150_scaffold_24879_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 83..598

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQC0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 171.0
  • Bit_score: 323
  • Evalue 1.10e-85
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 171.0
  • Bit_score: 323
  • Evalue 1.60e-85
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 177.0
  • Bit_score: 310
  • Evalue 3.10e-82

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGACGACAGCCGGTCGGCGCGTCCTGATCGGGCGCATCGTCGGGCTGTATGGCGTGCAGGGCTGGCTGAAGATCGAATCCTTCGCCGAGCCGCGCATGCGGATCTTCGATTACCAGCCGTGGCTGCTCGGTGCAGCGCCAGGCACGGAAAGAGAGGTCTCCGGCGTGAAAGGTCGACCGCAGGGCAAGGGCATGGTGGCCCAGTTGCCCGGGGTGGACGATCGGGACCAGGCGGCAGCGTTGATCGGTACCGACATCCATGTCGCCCGCGAACAGCTGCCTCCTCCGGCGAAGGGCGAGTATTACTGGGTCGACCTCGAAGGACTCGATGTCGTCACCACGGACAACGTGGAGCTGGGGCGGGTCAGCCACCTGTTCGCCACCGGCGCCAACGATGTCGTGGTGGTCAGGGACGGTACGCGCGAGCGGCTGATCCCCTTTGTCCAAGGGTCGTATGTGCGTTCGGTGGACTTGTCCGCAGGGCGCATGGTGGTGGACTGGGATCCCGAATTCTGA
PROTEIN sequence
Length: 172
MTTAGRRVLIGRIVGLYGVQGWLKIESFAEPRMRIFDYQPWLLGAAPGTEREVSGVKGRPQGKGMVAQLPGVDDRDQAAALIGTDIHVAREQLPPPAKGEYYWVDLEGLDVVTTDNVELGRVSHLFATGANDVVVVRDGTRERLIPFVQGSYVRSVDLSAGRMVVDWDPEF*