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scnpilot_solids1_trim150_scaffold_35535_2

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(689..1480)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003AC6544 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 288.0
  • Bit_score: 179
  • Evalue 5.30e-42
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 160.0
  • Bit_score: 141
  • Evalue 2.90e-31
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 219.0
  • Bit_score: 179
  • Evalue 5.70e-42

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCGTCTTCGCTACATCGAACTGTTCCATGCCGTGATGACCACCAACAGCCTGACCGGCGCGGCGAATCTGTTGAACATTTCGCAGCCGGCGGCGAGCAAGGCGCTGCAGCAGGCGGAGCACCAGCTCGGGTTCACCCTGTTCCATCGTGTGCGCGGGCGGCTGCATCCCACCGAGCAGGCGCTGCTGCTGCGTCCGCGCGTGGAGAAAATCATCCGCGACCTGCACGACCTGCAACGGCTCACCGCGAATTTCGCGCGGCCGGAGAGCGAACCGCTGCGGGTGACCTGCACGCCCACCCTGGCGCAGTCGCTGATCGGCCTCACCCTGCAGGACGCCAGCCACCCCGAGTTGCGCCAGGAGCCGCTGTGCCAGGGCCGCGTGATGGTGATCGCGCCGCCGGGCCGCTGGTCGCCCGCGGAACTGGCGCAGCCGCTGCCGGTGACGGCGCTGGCCGGCGAGCCGATGATCGGCATCGCCGTGCAGGATGCGCTGGGCAGCCTGCTGCAAAGCCACCTGATGCATGTCGACCCGCCGCCGCAGATCTCGGTGTGGGTGCAGACCTATCAACTCGCCTGCGCACTGGTGGCACAAGGTGCCGGGCTGGCGCTGGTCGACCCCTTCACCGCCTCCCAGGGCGACGGCGACGTGGTGCAGACGCGGCCGTTGGCGCTGGAGCTGGACGTGGTGCTGTACGCGGTGTACCGGCTGGACAGCCAGCTGAATCCCTTGCAGGAACACTTCATCGAACTGGTGCGCCAGCTGGCGCGGCAGACGCTTGCGCCGGGCTGA
PROTEIN sequence
Length: 264
MRLRYIELFHAVMTTNSLTGAANLLNISQPAASKALQQAEHQLGFTLFHRVRGRLHPTEQALLLRPRVEKIIRDLHDLQRLTANFARPESEPLRVTCTPTLAQSLIGLTLQDASHPELRQEPLCQGRVMVIAPPGRWSPAELAQPLPVTALAGEPMIGIAVQDALGSLLQSHLMHVDPPPQISVWVQTYQLACALVAQGAGLALVDPFTASQGDGDVVQTRPLALELDVVLYAVYRLDSQLNPLQEHFIELVRQLARQTLAPG*