ggKbase home page

scnpilot_solids1_trim150_scaffold_68353_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: comp(751..1173)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer ATPase TrbE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP29_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 140.0
  • Bit_score: 236
  • Evalue 1.90e-59
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:EIM01221.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 140.0
  • Bit_score: 236
  • Evalue 2.70e-59
trbE; Conjugative transfer protein TrbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 140.0
  • Bit_score: 232
  • Evalue 8.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GTGATCTTCGCCACGCAGTCGCTGGCCGACATCAAGGATTCGAGCATCGCGCCCGCGATCATCGAGAGCTGCGCGAGCCGCATCTTCCTGCCGAACCCGCAGGCGACCGAGCCTCAGATTCGGACGATCTACGAGGGGTTCGGCTTGAACAGTCGGCAGATCGAGATCGTCGCCACCGCCGAACCCAAGCGCGACTACTACTACCAATCGCGCCTTGGCAACCGCCTGTTCGATCTCGACCTCGGGCCGGTCGCGCTCGCGTTCGCTAGCGCTTCCATGCCGCAGGACCAGCGCGACATCGACGCCGTGCGCGCCGGCGCCCAGCCGGGCGGCTTCGCCGCGGACTGGCTGCGGCATCGCGGCCTCGGCTGGGCCGCCGACCTCATCCCAACGTTTTCCTCGTCCTCGGAGCTTCGACCATGA
PROTEIN sequence
Length: 141
VIFATQSLADIKDSSIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSRQIEIVATAEPKRDYYYQSRLGNRLFDLDLGPVALAFASASMPQDQRDIDAVRAGAQPGGFAADWLRHRGLGWAADLIPTFSSSSELRP*