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scnpilot_solids1_trim150_scaffold_41870_3

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_68_45

partial RP 9 / 55 BSCG 10 / 51 ASCG 2 / 38
Location: 1229..1444

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIL92668.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIL92668.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 72.0
  • Bit_score: 81
  • Evalue 5.70e-13
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZM7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 72.0
  • Bit_score: 81
  • Evalue 4.10e-13
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 57.0
  • Bit_score: 75
  • Evalue 7.00e-12

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGAGCCCGTCGATGACATCACCGATGGCAGCGGAGCGTCGGCCGTGAATGCCGCCGCCGGCATGCTCGAGGCCGACCTGCTCGCCGCGGGCGAGCCGGGCGCTGCGCGCGCGGTGCCGGCCACGCTGGATGCGTTCCTGGCCGACGTGGAGCGCCGCGCGTTCCGCATGGCCGAGCTGCAGTTGCGCCATCGCGAGGACGCCATGGACGCGGTG
PROTEIN sequence
Length: 72
MEPVDDITDGSGASAVNAAAGMLEADLLAAGEPGAARAVPATLDAFLADVERRAFRMAELQLRHREDAMDAV