ggKbase home page

scnpilot_solids1_trim150_scaffold_5385_4

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(3276..3770)

Top 3 Functional Annotations

Value Algorithm Source
Calcium-binding EF-hand n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCP6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 173.0
  • Bit_score: 196
  • Evalue 1.50e-47
Calcium-binding EF-hand {ECO:0000313|EMBL:KGB54175.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 168.0
  • Bit_score: 200
  • Evalue 1.90e-48
calcium-binding EF-hand similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 165.0
  • Bit_score: 184
  • Evalue 3.20e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGTTGAAACATATGCTTATGATCGGCGCGGCCGCGGTGAGTTTCCCCGCGTTCGCGCAGACGGAAACCCCGCCGCCCGACGATGCGACGCAGACCGCGCCCGAAACAATGCCGCCGGCTGAAACGACCGCACCGGCACCGGTCGAACCGGACACGCCGCCGCCGGTGGACGACATGACGGCCCAGCCGGCTCCGTCGAGCCCGCCGCCGCAGTCGAGTCCCGCCCCGTCGGACAGCGCTGCGACCCCGAGCCAGATCGCGCAGATCGTCGAGCAGGAATTTCCCACCTATGACGGCGACGCGAACGGCGAACTCAGCGAGACGGAATTCTCCGCCTGGATGAAGAAGCTGCGCACCGCGACCGACCCGACGGTCGATCCCGAATCGGAGCAGGTGAAGAGCTGGGTTGCCCAGGCGTTCGGCGCCGCCGATGCCGACAAGTCGGGCGGCGTCAGCAAGACCGAACTCATCGGCTTCCTGTCGCGCGGCGCCTGA
PROTEIN sequence
Length: 165
MLKHMLMIGAAAVSFPAFAQTETPPPDDATQTAPETMPPAETTAPAPVEPDTPPPVDDMTAQPAPSSPPPQSSPAPSDSAATPSQIAQIVEQEFPTYDGDANGELSETEFSAWMKKLRTATDPTVDPESEQVKSWVAQAFGAADADKSGGVSKTELIGFLSRGA*