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scnpilot_solids1_trim150_scaffold_6607_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1435..2313

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSQ2_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 292.0
  • Bit_score: 533
  • Evalue 1.60e-148
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 292.0
  • Bit_score: 533
  • Evalue 5.00e-149
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF53320.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 292.0
  • Bit_score: 533
  • Evalue 2.20e-148

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCAACGCCTTCCCCCCCTCAGCAGCATGGAGGCTTTTCTGGAGGTCGCGCGCCACGGCACGGTGAAAGCCGCCGCGAGCGAACTCGGCCTGTCGATGCCAGCACTGTCGCGGCGTATCCAGACGCTCGAGCATGCGGTCGGCCGCCCGCTGTTCAATCGGCATCATCATGGCCTGAAGCTCACCGAAACCGGGCGTCAGTTGCAGGATCAGCTCGGCCCGATCCTCGATGATCTGCGGTCGGTGCTCGTCCGCGCCGGCAGCCCGGAAGCTTCGCTCCGCCTGCATCTCAACGTCCTGCCGCTCTTTGCGCAGCAGCGGCTTTTCCCGCGACTGCCCGCGCTACGGCAGCAGCATCCCGAACTGCATATCGACATCGACACCATGTCGCACGCCGAGGCGCGGCTGGGCGAAGGGATCGACGCGGCGATCGCTCTGGCGCGCGCGATCGATCCAGCACTCTACGCGGCCCGGCTCGATCAGAACAAGGTGTTCCCCATCGCATCGCGCGCGCTGACCGACGGCGACCGCCCGATCACGGTGCCTGAACAGCTTCAGCGGATGACCATCCTGCTGCATCGCGAGATGCCCGAAACCTTCAGCGAATGGCGGCAGGCGATCGGCATGCCCTATCTGGAACCGGCGGGGGTCGATTTCTTCGATTCGGGGCCGCTGATCCTGGAAGCCGCGGCGCAGGGCATCGGCGTCGCCTTCATGCACGCGCACCATTTCGACGACGCGCAGGACCCGCGGCTCGTGCGCCTGTTCGATTTCGACGTCGACAGCAGCTACAGCTATTGGTTCGTCTGCCGCCCGCGCGCGCTGCGCCAGCCCGCCGTGAAGCTGTTCCACGACTGGCTGCTGGCGACGAAAATCTGA
PROTEIN sequence
Length: 293
MQRLPPLSSMEAFLEVARHGTVKAAASELGLSMPALSRRIQTLEHAVGRPLFNRHHHGLKLTETGRQLQDQLGPILDDLRSVLVRAGSPEASLRLHLNVLPLFAQQRLFPRLPALRQQHPELHIDIDTMSHAEARLGEGIDAAIALARAIDPALYAARLDQNKVFPIASRALTDGDRPITVPEQLQRMTILLHREMPETFSEWRQAIGMPYLEPAGVDFFDSGPLILEAAAQGIGVAFMHAHHFDDAQDPRLVRLFDFDVDSSYSYWFVCRPRALRQPAVKLFHDWLLATKI*