ggKbase home page

scnpilot_solids1_trim150_scaffold_8188_4

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(2076..2288)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSP6_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 128
  • Evalue 3.70e-27
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KGB53990.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 130
  • Evalue 1.10e-27
XRE family transcriptional regulator; K07729 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 128
  • Evalue 1.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGAACAACAAGTTGAAGATATTGCGCGCGATGCGCAACTGGAGCCAGGCCGAACTGGCCGAGCGGCTCGATGTGTCGCGGCAGGCGGTCAATGCGATCGAAACGGGCAAATACGACCCGTCGCTGCCGCTCGCCTTCAAGCTGGCGCGCCTGTTCGGCATGCCGATCGAGGAAATCTTCGACGATGGCCAGAAAGGACATGCCGATGACTGA
PROTEIN sequence
Length: 71
MNNKLKILRAMRNWSQAELAERLDVSRQAVNAIETGKYDPSLPLAFKLARLFGMPIEEIFDDGQKGHADD*