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scnpilot_solids1_trim150_scaffold_6885_4

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 2109..3005

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSY1_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 297.0
  • Bit_score: 438
  • Evalue 4.20e-120
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGB57282.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 300.0
  • Bit_score: 451
  • Evalue 6.70e-124
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 297.0
  • Bit_score: 438
  • Evalue 1.30e-120
  • rbh

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Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGATAAAGCGCGCGCACATCCGCCAGTTCCTCGCCGTCGTCGATGCGGGCAGCTTCACGCGCGCCGCGCAGCACATCCGCGTTACCCAGCCGGCGCTGTCGACCGGCATCGCCGACCTCGAACGGCTCGTCGGCGCGCCTTTGTTTATCCGCAACCGCCGCCAGATTCGCCTGACCGAGGCGGGCGGCCGCTTCCTACCGATCGCGCGCGACCTCGAACGCGGCTTTCGCGCTGCCGACACCTTCGGCCGCGCCGAGGAAAGCGACCGGCCGGCGTTGAAACTCGGCACGATCCGGTCGGTTCCCGGCGAGTTTCTGCAGGCCGTCGCGGCGCTGCTCGCGCGTGACTTCGCGATCGAGATCGTCGAGAATGGCGAGTCGGACCTGCGCGCCGGCGTCCACGGCGGGCGGCTGCATATCGCGCTCGTCCCGCTGCGCCCCGGCGAGCGCGGGCCGCATGTCGTCCCGCTCTATGACGAACCGCTGGTGATGTTCGTCGCCGCCGACCACCCGCTGGCCGGGCGCGGGGAGGTCGGCCCCGAGGAACTGGCGCCCGAGACGATGATCGCGCGCCGCGCCTGCGAATTGCTCGACGCGACCAGCCGCTTCTTCACGCGCCACCGCGTTCGCCCGCGCTTCGCGCTGCGCAGCGACAGCGACGAGCGCTGCCTGCGCATGGTCGCGGCGGGGGGGGGCATCACCACCGCGCCGGTGTCGCTCGCGATCGACGGCATCGTGCCGTTGCGGGTCGGCGGCTATGACCTGCGCCGCGAGCTTGGCCTGCTGATCCATCCGGCGTGGCGCGCGCAGGCCGATGTCGCGCCGCGGCTCGCGCACGCGCTGCCCGCGATCGAGCGCGCGGCGACCGACTGGCGCGCGGCGAAGGTCGATGGTTGA
PROTEIN sequence
Length: 299
MIKRAHIRQFLAVVDAGSFTRAAQHIRVTQPALSTGIADLERLVGAPLFIRNRRQIRLTEAGGRFLPIARDLERGFRAADTFGRAEESDRPALKLGTIRSVPGEFLQAVAALLARDFAIEIVENGESDLRAGVHGGRLHIALVPLRPGERGPHVVPLYDEPLVMFVAADHPLAGRGEVGPEELAPETMIARRACELLDATSRFFTRHRVRPRFALRSDSDERCLRMVAAGGGITTAPVSLAIDGIVPLRVGGYDLRRELGLLIHPAWRAQADVAPRLAHALPAIERAATDWRAAKVDG*