ggKbase home page

scnpilot_solids1_trim150_scaffold_14985_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: 1..942

Top 3 Functional Annotations

Value Algorithm Source
Permease YjgP/YjgQ n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR36_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 314.0
  • Bit_score: 531
  • Evalue 6.50e-148
  • rbh
Permease YjgP/YjgQ {ECO:0000313|EMBL:KGB58624.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 314.0
  • Bit_score: 543
  • Evalue 2.30e-151
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 314.0
  • Bit_score: 531
  • Evalue 2.00e-148
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC363 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
AACAGCGACAGCGACGTGTGGCGCTATGTCGGGCTGCGCTTTCCGCAGATCGTCGAAACCTTCCTGCCCTTTTCGGTGCTGCTCGGCACCATATTGACGCTCGCGACGCTCAACCAGAACAGCGAGGTGATCGCGATGAAGGCGTCCGGCATGTCGGCGCATCAGGTGCTCGCGCCGCTGTTCCTTGCCGCGCTGCTCGTCGCCGGGATCAGCTTCGCCTTCAACGAACGCATCGTCACCCGCGCGACCGCGGCGCTCAGCGCGTGGCAGAAGGTCGAATATGCGCAGATTCCGCCCGATACGGGCGTCCGCACCAACGTCTGGGTCCGCGCCGGCGACGACCTGATCAACGCCGAAACGGTCGAGACGAAGGGTGCGGCGGTGCTGCTCCGCAACGTCACCATCATCGAACGCAAGGGCGGCGTGCTGGCGTCGATGCTGTCGGCCGACAGCGGCCGCGCGGTCGCGGGCGGATGGGAATTCACCGGCGCGCGGCGCTTCATCCGCCGGTCGGGAACGGTCGAGCCGCTCGGCACCATCATAGCCGCCAAGGGGGTGCGCCCCGACCAGTTCACGCTGGCGCAGGTCGATGGCGACGAACTGCCCTTCCTAGCGCTCAAGAGCGCGATCAACGACCTCGAGGTCGCGGGGCGGCCGGTCGACGCGCTGAAAGGCGTGCTGTGGCACAAGATTTCGGGGCCGCTGTCGGCGATCCTGATGCCGCTGCTCGGCGCCGTCGCGGCCTTCGGCCTCGCGCGGTCGGGCAAGCTGTTCGTGCGCGCGATCCTGGGCATGGCGCTGGGCTTCGCCTATTTCGTCGCCGACAATTTCGCGCTCGCGATGGGCGATCTGGGCGCCTATCCGCCGTTCCTCGCGGCGTGGGGGCCGTTCATCCTGTTCGCGCTGATCGGCGAGATGATCCTGATCCGAACCGAAGAATAG
PROTEIN sequence
Length: 314
NSDSDVWRYVGLRFPQIVETFLPFSVLLGTILTLATLNQNSEVIAMKASGMSAHQVLAPLFLAALLVAGISFAFNERIVTRATAALSAWQKVEYAQIPPDTGVRTNVWVRAGDDLINAETVETKGAAVLLRNVTIIERKGGVLASMLSADSGRAVAGGWEFTGARRFIRRSGTVEPLGTIIAAKGVRPDQFTLAQVDGDELPFLALKSAINDLEVAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFGLARSGKLFVRAILGMALGFAYFVADNFALAMGDLGAYPPFLAAWGPFILFALIGEMILIRTEE*