ggKbase home page

scnpilot_solids1_trim150_scaffold_25554_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(367..1479)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 370.0
  • Bit_score: 362
  • Evalue 8.60e-97
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EK52_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 370.0
  • Bit_score: 362
  • Evalue 6.20e-97
  • rbh
two component sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 344.0
  • Bit_score: 271
  • Evalue 3.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
GATGCCGTAGCGCGGATGAACGATATGTGGCATCCGCGCCTGCGCATTACGCGGCACGACGCCCCGCCGGCGGTAGGCGGGGGCGCGGTGTCGGCCGACCGCGAGATCGCCCGGCGGGTGATCGCGTCGCAGCCCCGCTTGGCGCCGCTCGACCTCCACGCCGTGCGCGACGGCGACGCGCTCCACGGCACGATCCGGCTGAGCCATGGCGGCTGGCTGAGCTTCCGGTCCGAAGATTATTTTCAGGGCTATCCCTATTTCTACCATTATACCGCGTCGGTGCTGTCGCTGCTCGTCAGCGTGGTGCTGCTGGCGCTGCTGTTCGGCCGGATGATCGGGCGACCGCTGGCCGATATCGCGGCGGCGGCCGAGCATGTCGGGCGCGACGCCCCGGTTGCCATCGCCGCCACCGGCCCGCGCGAGGTGCGCCAGGTGGCCGCCGCCTTCGACCGCATGCAGGCGCGGCTGCTCGACCATGTCGGCGAGCGCGTCCAGTCGCTCGCGGCGATGTCGCACGACCTGCGGACGCCGCTCGCCCGGCTGCGGCTCAACGCCTCGGCGGTCGACGATGCGGAGACCCGCGCCGCGCTGGATCAGGACATTGTCGAGATGGAGGCGTTCGTCACCTCCGTGCTCGATTATCTGCGCGGCGACGAGCCCGAGCAGGAACAGTGGGCCGACCTGGCGTCGATCGTGATGACGGTGGTGGACGAGGCGCGCGATGCCGGCGGCGCGGTAAGCTATGACGGGCCGGACCGGCTGGAAGGCGTCACCCGGCCGCTGAAATTGAAACGCCTGTTGCGCAACATCGTCCAGAACGGGGTGCGCCATGCCGGGCCGACGCGGGTCCGCCTGATCCACGATGCGAATCGGATCGTCATCGGGGTGGATGACGACGGCCCCGGCATCCCCGAAGACAAGCTCGACGCCGTGCTGAAACCCTTTACGCGGCTGGAGACATCGCGCAGCCGGAGCACGGGCGGAGCGGGTCTCGGCCTTGCCATAGCGCACCAGCTTTCTCAGCGGCTTGGCGGTGAGATTGCCCTGTCCAACCGCTCCGGCGGCGGCCTTTCAGTCACCATGTGGCTGCCGTTCGCGCCGCGGCAAAGTTGA
PROTEIN sequence
Length: 371
DAVARMNDMWHPRLRITRHDAPPAVGGGAVSADREIARRVIASQPRLAPLDLHAVRDGDALHGTIRLSHGGWLSFRSEDYFQGYPYFYHYTASVLSLLVSVVLLALLFGRMIGRPLADIAAAAEHVGRDAPVAIAATGPREVRQVAAAFDRMQARLLDHVGERVQSLAAMSHDLRTPLARLRLNASAVDDAETRAALDQDIVEMEAFVTSVLDYLRGDEPEQEQWADLASIVMTVVDEARDAGGAVSYDGPDRLEGVTRPLKLKRLLRNIVQNGVRHAGPTRVRLIHDANRIVIGVDDDGPGIPEDKLDAVLKPFTRLETSRSRSTGGAGLGLAIAHQLSQRLGGEIALSNRSGGGLSVTMWLPFAPRQS*