ggKbase home page

scnpilot_solids1_trim150_scaffold_32894_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(436..1230)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 261.0
  • Bit_score: 479
  • Evalue 5.90e-133
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 261.0
  • Bit_score: 479
  • Evalue 2.70e-132
3-isopropylmalate dehydrogenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GU70_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 261.0
  • Bit_score: 479
  • Evalue 1.90e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GGCCTGCGCGCCGAACTGGGGCTGTTCGCCAACCTGCGCCCCGCGAAGCTGTTTCCGGGGCTCGAAGACAGCTCCGCGCTGCGTCCAGAGGTCGCGTCGGCGATCGACCTGCTGATCGTCCGCGAACTCAACGGCGACGTCTATTTCGGCGAGAAGGGCACGCGCACGACCGCAGGCGGCGAGCGCGAGGGCTATGACGTCATGGCGTACAGCGAGAGCGAAGTGCGGCGGATCGCGCAGGTCGCCTTCCGCGCGGCACAGGGGCGCGGCAAGCGGCTCTGCTCGGTCGACAAGGCCAATGTCCTCGAAACCTCGCAGCTCTGGCGCGACGTGGTGATCGAGGTCGCGGCCGAATATCCCGACGTCGCGCTCAGCCACATGTATGTCGACAATGCCGCGATGCAGCTCGTCCGCAATCCCGGCCAGTTCGACGTGATCGTCACCGGCAATCTGTTCGGCGACATATTGTCCGACCAGGCGTCGATGTGCGTCGGCTCGATCGGCCTGCTCGCCTCGGCCTCGCTGGGCAAGGGACGCCGCGGGCTCTACGAGCCGATCCACGGCAGCGCACCCGACATCGCGGGCAAGGGGATCGCCAACCCGCTGGCGATGATCCTGTCGCTCGCCATGCTGCTGCGCCATTCGGGCGGCGACGAGGCGAATGCGGCGCGGATCGAGGCGGCGGTGGGGCAGGTGCTCGCCGACGGTTGCCGCGGCGCCGACCTTGGCGGCACGATGGGAACGACCGCGCTCGGCGATGCGGTGGTTTCGGCTTTGAACGGACAGGGCAGATGA
PROTEIN sequence
Length: 265
GLRAELGLFANLRPAKLFPGLEDSSALRPEVASAIDLLIVRELNGDVYFGEKGTRTTAGGEREGYDVMAYSESEVRRIAQVAFRAAQGRGKRLCSVDKANVLETSQLWRDVVIEVAAEYPDVALSHMYVDNAAMQLVRNPGQFDVIVTGNLFGDILSDQASMCVGSIGLLASASLGKGRRGLYEPIHGSAPDIAGKGIANPLAMILSLAMLLRHSGGDEANAARIEAAVGQVLADGCRGADLGGTMGTTALGDAVVSALNGQGR*