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scnpilot_solids1_trim150_scaffold_34170_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_68_7

partial RP 31 / 55 MC: 1 BSCG 33 / 51 MC: 2 ASCG 8 / 38 MC: 1
Location: comp(274..1197)

Top 3 Functional Annotations

Value Algorithm Source
Putative branched-chain amino acid ABC transporter, periplasmic component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGF3_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 304.0
  • Bit_score: 274
  • Evalue 1.10e-70
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDO59818.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 306.0
  • Bit_score: 285
  • Evalue 6.50e-74
putative branched-chain amino acid ABC transporter, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 304.0
  • Bit_score: 274
  • Evalue 3.40e-71

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GGCAAGCGCGATCTTCTGTTGATGCCGGTGGATGAAGGCAGCAACCCGGCCGAAACCGCCGCCGCGGCGCGCAAGCTTCTGGATCAGGGGGCGGAGATTATTATCGGGCCGTTGTTCGCCTCCGCCGTTTCCGCCGTGGCACCCATCGCGCGCGACCGCGGTGTGCCGGTGCTCGCCTTCTCGACCGACCGCACTGTGGCGGGCCACGGGGTTTACCTGTTGAGCTTCCAGCCCGAAGACGAAGTGCGCGCGATCGTCACCTATGCCGCAAGCCAGGGCCATACCCGCTTTGCCGCGCTGACACCCCTGACCCCTTATGGCGACCGGGTGACAGCGGCTTTTCGCACCACAGTCCAGGATGTGAAAGGCACGGTTTCGGGAATCGAACGCTTCGATCCTTCGTCCGGCACCGCGGTGGCGCAATCCGCCGCCATAGCAAAGGGTCAGCCCGATTCGGTGCTGATCGCACAGGGCGGCGCGTTGTTGCGCGGCATTGCGCCGACACTGGTGGTGAACGGGCTTCCGCCGGAGACGGTCAAATATCTCGGCACCGGGGTGTGGGACGACCCCACCATTGCACAGGAACCGGCGCTGCAGGGCGGCTGGTTCGCCGCCCCCACCCCCAATGCGCAGGATGGTTTCGACGCCCGATTCCACGCCGTGTTCGGCACCACGCCGCCACAGCTTGCCACCCTTCCTTACGATGCAGTGTCGCTGGTGGCGCTATTGTCGGCGGGCGAACCCTATCACCGCTTCACCGATGCGGCCTTGACCGATCCCAACGGTTTCGCCGGTGTGGACGGGATTTTCCGCTTCTTCCCCGATGGTTCGGACGAGCGCGGGCTTGCCATTCTGCGGGTGGCGCCGGACGGCTTTCAGATTCAGCAGCCGGCGCCGGCCACCTTCCAGCCACTCGGTGGATAA
PROTEIN sequence
Length: 308
GKRDLLLMPVDEGSNPAETAAAARKLLDQGAEIIIGPLFASAVSAVAPIARDRGVPVLAFSTDRTVAGHGVYLLSFQPEDEVRAIVTYAASQGHTRFAALTPLTPYGDRVTAAFRTTVQDVKGTVSGIERFDPSSGTAVAQSAAIAKGQPDSVLIAQGGALLRGIAPTLVVNGLPPETVKYLGTGVWDDPTIAQEPALQGGWFAAPTPNAQDGFDARFHAVFGTTPPQLATLPYDAVSLVALLSAGEPYHRFTDAALTDPNGFAGVDGIFRFFPDGSDERGLAILRVAPDGFQIQQPAPATFQPLGG*