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scnpilot_solids1_trim150_scaffold_8365_2

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: comp(940..1749)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigB n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MHU0_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 233.0
  • Bit_score: 220
  • Evalue 2.80e-54
sigma-B/F/G subfamily RNA polymerase sigma-28 factor; K03090 RNA polymerase sigma-B factor similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 260.0
  • Bit_score: 219
  • Evalue 1.50e-54
Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 261.0
  • Bit_score: 227
  • Evalue 1.90e-56

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGGCAGCCAACAGCGACGAGAAACGACCTGTCCCGGAAGGGGCGCCGAACGGGCCGGGCGAGGGCCTGGCCGCCGAGACGCTGCTCTGGCGCCGCCTGCGCGACCAGCGCGACCCGGCCGCCCGCGAGGAGCTCGTCCGCCGCTATCTCCCCTTCGCCAAGAACCTGGCGCTGCGCTACCGCGGCGCCAGCGAGTCCTTCGACGACCTCCTGCAGGTGGCGAACCTCGGCCTGGTCAACGCCGTCGACCGCTTCGACCCGGCCCGCGGCACCCCCTTCGCCGCCTTCGCCTCCCCCACCATCCTCGGCGAACTGAAGCGCCACTTCCGCGATCGCGTCTGGACGGTGCGGGTGCCGCGCGGCCTCCACGACCGGATGGCCGAGGTGGAGAAAGCGACCACGCAGCTGACGGTGGAGCTGCAGCGCTCGCCCTCGGTCAACGAGATCGCCGCCAAACTGGAGATCGACCCGGCCGAAGTCCTCGAGGTCCTGGAGGCCAACCACAACCGCCGGCCGCTCTCCCTCGACCGCCCGGTCGGCGGCGAGGAGGACGAATCGCCCGCCTCCGAGTGGGTCGGCGACGAGGACGAGGGCTACGAGCTGATCGACGACAAACTGGCGCTGGAGGACGTCCTGCCCCAGCTTGACGACCGCGAACGCCTGATCCTCCGCCTGCGCTTCGTCGAGGACATGACCCAGTCCCAGATCGCCGAGCAGATCGGCCACTCCCAGATGCACGTCTCCCGCATCCTCCGCCGCACCCTGGAGCGGATCCGCGAGCAGGTCGCCGAGCAGGACGGCGAAGGCTAG
PROTEIN sequence
Length: 270
MAANSDEKRPVPEGAPNGPGEGLAAETLLWRRLRDQRDPAAREELVRRYLPFAKNLALRYRGASESFDDLLQVANLGLVNAVDRFDPARGTPFAAFASPTILGELKRHFRDRVWTVRVPRGLHDRMAEVEKATTQLTVELQRSPSVNEIAAKLEIDPAEVLEVLEANHNRRPLSLDRPVGGEEDESPASEWVGDEDEGYELIDDKLALEDVLPQLDDRERLILRLRFVEDMTQSQIAEQIGHSQMHVSRILRRTLERIREQVAEQDGEG*