ggKbase home page

scnpilot_solids1_trim150_scaffold_8562_4

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: 2304..3125

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 272.0
  • Bit_score: 406
  • Evalue 3.90e-110
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 272.0
  • Bit_score: 393
  • Evalue 7.60e-107
  • rbh
16S rRNA methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380FC60 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 272.0
  • Bit_score: 408
  • Evalue 7.20e-111
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GTGATCATCCTCGCGGCCACGCCCATCGGCAACCTGGGGGATGCCTCGCGGCGGCTGGTGGAGGCGCTGAGCTCCGTGACGGTGATCGCAGCGGAGGACACCCGCACCGCGCAGAAGCTGCTCATGGCCCTGGGCGTCGAGAACCGGCCGCGCCTGGTGGCGCTGCACGACCACAACGAGAAGGAGCGCGCGGCGGAGATCGTCGCCCTCGCCCGCGACCTCGACGTGCTGCTGCTCAGCGACGCCGGGATGCCGACGGTCAGCGATCCCGGGTATGGCGTCGTCGCCGAAGCAGCCGCGCAGGGCGTCGAGGTGACCGCGATCCCGGGGCCCAGCGCGGTCGTCACCGCGCTGGCGATCGCGGGGCTTCCCACCGACCGGTTCACGTTCGAGGGGTTCGTGCCGCGCAAGCCCGCCGAACGAGAGCGGACGCTGCGGGAGCTTTCCGCCGAGCCGCGCACCATGGTGTTCTTCGAGGCGCCCTCGCGCATCGCGCAGACGCTGCACGACATGGCGGGGGCGTTCGGCACGTCGCGGCCGGCGGCGGTCTGCCGCGAGCTGACGAAGCTGCACGAGGAGGTCGTGCGTGCCCCGCTGGGCGACCTGGCCGCGTGGGCTGCCGCCGGCGTGCGCGGCGAGATCGTGATCGTCGTCGGGGGAGCGCCGGCGCGCCGCATCCCGCTCTCCGACGCCGTCACCGAGGTGCTCGAGCTCACTCGCACCGGTGCGCGGATGAAGGATGCCGCAGCAGAGGTGGCCGATGCCACCGGTCACTCCCGGCGTGAGCTGTATCAGGCCGCGCTCGCCGTCAAGAACGGCTGA
PROTEIN sequence
Length: 274
VIILAATPIGNLGDASRRLVEALSSVTVIAAEDTRTAQKLLMALGVENRPRLVALHDHNEKERAAEIVALARDLDVLLLSDAGMPTVSDPGYGVVAEAAAQGVEVTAIPGPSAVVTALAIAGLPTDRFTFEGFVPRKPAERERTLRELSAEPRTMVFFEAPSRIAQTLHDMAGAFGTSRPAAVCRELTKLHEEVVRAPLGDLAAWAAAGVRGEIVIVVGGAPARRIPLSDAVTEVLELTRTGARMKDAAAEVADATGHSRRELYQAALAVKNG*