ggKbase home page

scnpilot_solids1_trim150_scaffold_18767_4

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: comp(1298..1840)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000306F39F similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 178
  • Evalue 4.70e-42
large extracellular alpha-helical protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 168.0
  • Bit_score: 164
  • Evalue 3.80e-38
Large extracellular alpha-helical protein {ECO:0000313|EMBL:BAJ73508.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 168.0
  • Bit_score: 164
  • Evalue 1.70e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GAGGCGGGCTCGGTGCGCCTGGTCGCCTCGGCGAAGGGGCGCACCGTCCCGCAGGTGTCGGGCGCCTCATCGGTGAGCATCGCCGCCGACGATCTCGGCGGCTTCGCGGCCAATGCGTGCGCGCCCGCACTGATGGACTCCTGGGTGGTGGGCGGGTCGACGATGAGCGGCGCCGCCGACCTCATCGCCCTGGCCAATCCCGGTCAGGTGGCGGCGACCGTGGACCTGACGATGTTCGGCAAGGACGGGCAGACCCAGCCCGCGGGCGGGAACTCCATCGTCATCGCTCCGGGCACCGAGGAGGTCATCCCTCTCGCGGGCCTCGGGATCGGTGAAGACGCGCCCGTCGTGCGGGTGACCGCCACCGGCGCACCCGTGCGTGCGGCGCTGCAGTCCAGCCTGAGCCGAGGCCTCAGCACCAGCGGTGTCGATCAGAGCGGCGTCGTGTCGGTGGCATCCTCTCGTCTGGTCGTCACGGGCGTGCATGTCACTCGCGAACAGCAGGACGACCCGACGACGGTGGTGCGCCTGCTCGCACCCTAG
PROTEIN sequence
Length: 181
EAGSVRLVASAKGRTVPQVSGASSVSIAADDLGGFAANACAPALMDSWVVGGSTMSGAADLIALANPGQVAATVDLTMFGKDGQTQPAGGNSIVIAPGTEEVIPLAGLGIGEDAPVVRVTATGAPVRAALQSSLSRGLSTSGVDQSGVVSVASSRLVVTGVHVTREQQDDPTTVVRLLAP*