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scnpilot_solids1_trim150_scaffold_20847_1

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..556)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002F17C1D similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 183.0
  • Bit_score: 310
  • Evalue 1.10e-81
Putative transcriptional regulatory protein TcrX {ECO:0000313|EMBL:KJL34880.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 185.0
  • Bit_score: 315
  • Evalue 6.00e-83
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 185.0
  • Bit_score: 309
  • Evalue 5.70e-82

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACCATGACAGTCTCGGGAATCTCGTTGCAGCGCGCCGACGGCTCCGCCCCGCGCATCCTTGTCGTCGATGACGAGCAGATGCTCACGGACCTGCTGTCCATGGCTCTGCGCATGGAGGGCTGGGACGTGCACACCGCCGCCAGCGGGTTCGAAGCGCTGCAGGCCGCGCGCGACTTCACGCCCGACGCGATGGTGCTGGACATCATGATGCCGGACCTGGACGGCATGAGCGTGCTGCAGCGACTGCGCCACAGCGGGAACAACGTGCCGGTGCTGTTCCTGACCGCGAAGGATGCCGTCAGCGACCGCGTCGCGGGCCTGACCGCGGGGGGCGACGACTACGTCACCAAGCCGTTCAGCCTCGAAGAGGTCGTGGCCCGGCTGCGCGGGCTCATGCGCCGTGCCGGCACCGCGCAGTCGGCCGAGGCCGAGCCCATCCTGCGGGTGGGCGACCTGTCGCTGAACGAGGACAGCCACGAGGTCGAGCGCGCCGGGCGCGAGATCGAGCTCACGGCCACCGAGTTCGAGCTGCTGCGCTACCTCATGCGCAAC
PROTEIN sequence
Length: 185
MTMTVSGISLQRADGSAPRILVVDDEQMLTDLLSMALRMEGWDVHTAASGFEALQAARDFTPDAMVLDIMMPDLDGMSVLQRLRHSGNNVPVLFLTAKDAVSDRVAGLTAGGDDYVTKPFSLEEVVARLRGLMRRAGTAQSAEAEPILRVGDLSLNEDSHEVERAGREIELTATEFELLRYLMRN