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scnpilot_solids1_trim150_scaffold_23369_2

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: 1103..2449

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 279.0
  • Bit_score: 432
  • Evalue 8.20e-118
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 281.0
  • Bit_score: 424
  • Evalue 5.00e-116
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 281.0
  • Bit_score: 424
  • Evalue 1.60e-115
  • rbh

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGGACGACGGGCTGATCCGGTTCGTGCAGCAGCCGCGGTCAGCGTGGGCGAACGGCCTGGGTGAGACCGTCGAACTGTGGCGCACACCCGCCGCGGGAGCCTTCGACATGCGGCTGAGCATCGCGACAGTGGGCGAGAGCGGCCCGTTCTCGCGCCTTCCGGGCATCGATCGGGTGCTGATGCCGCTGGCCGAAGGCGGCCTCGCGCTGCGCCTCGACGGCGAGGTCACGCCGGTCGCGCAGTACGACACGATCCGGTTCGCCGGCGAGGCGGATGCCGCAAGCGTCGAGGTCACCGCATCGGGGTACGACCTGAACCTCATGGTGCGCCGCGGCCTCGGTCGTCCGGACCTCGTCGCGCATCGCGTGCATGGGCTGCGGCCGGCGGACGTGCCGGGACTCATCGCGGTGATCGCGCTGGACGGCGAGGTGTGTTGGGCCGGTTACACGCTCTCGTTCGGCGACACGGTGCTCGGAGCGCCGCGCCGATACGCTGAAACCGTGCGCATCCGGCTTGACATCGCCTACGACGGTACCCACTTCCGCGGGTGGGCGCGCCAGCCCGGGCTGCGCACTGTTCAGGGGACGCTCGAACAGGCCCTGGCACGCATCCTCGGGGGCCAGGTGCGGCTCGTGGTTGCCGGGCGCACCGACGCCGGGGTGCATGCTCGTGGCCAGGTCGCGCACTTAGACCTCGACGATGAGCAGCGGGAACGGCTGTTCACGCGCACGCGGCGGGACGGCGCGGGAGATCCGGTCGAGCGTCTTGCCTATCGCGTGCGCGGGGCGCTGGGCGCCTACTCCGACGTCACCGTGCGTCGCACGCAGATCGCGCCCGACGGGTTCGACGCCCGGTTCTCGGCGGTGTGGCGGCGCTATGAGTACCGGGTCGCGGATCAGATCAGCGGCTACGACCCGCTGGAGCGGGCCCGCACGACCACCGTGCGCGGGGCGCTCGACGTGGATGCGATGGATGCCGCGGCGCGGTCGCTCATCGGATTGCACGACTTCGCGGCGTACTGCAAGCCGCGCGACGAGGCGACCACGATCCGCACCCTGCTGGAGTTCGACTGGCGCCGGGAGGCCGACGGCGTGCTGGTGGCCAACATACGCGCCGACGCGTTCTGCCACTCCATGGTGCGGGCGCTGGTGGGCGCGTGCGTGGCGGTCGGCGACGGCCGGCTGTCGGTCGGGGATGCGGCGACGCTGCGCGACGCGGGGGAACGGACCAGCGCCTTCGCTGTGCTTGCCGCACGTGGTCTCACCCTGGCCGAGGTCGGCTATCCCGCCGACGATCTGCTCGCGGCGCGGGCCGAGCAGACCCGCGCGCGCCGCGACGCGGAGTAG
PROTEIN sequence
Length: 449
MDDGLIRFVQQPRSAWANGLGETVELWRTPAAGAFDMRLSIATVGESGPFSRLPGIDRVLMPLAEGGLALRLDGEVTPVAQYDTIRFAGEADAASVEVTASGYDLNLMVRRGLGRPDLVAHRVHGLRPADVPGLIAVIALDGEVCWAGYTLSFGDTVLGAPRRYAETVRIRLDIAYDGTHFRGWARQPGLRTVQGTLEQALARILGGQVRLVVAGRTDAGVHARGQVAHLDLDDEQRERLFTRTRRDGAGDPVERLAYRVRGALGAYSDVTVRRTQIAPDGFDARFSAVWRRYEYRVADQISGYDPLERARTTTVRGALDVDAMDAAARSLIGLHDFAAYCKPRDEATTIRTLLEFDWRREADGVLVANIRADAFCHSMVRALVGACVAVGDGRLSVGDAATLRDAGERTSAFAVLAARGLTLAEVGYPADDLLAARAEQTRARRDAE*