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scnpilot_solids1_trim150_scaffold_36849_1

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: 1..852

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 280.0
  • Bit_score: 454
  • Evalue 2.20e-125
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 280.0
  • Bit_score: 454
  • Evalue 9.80e-125
transcription-repair coupling factor n=1 Tax=Microbacterium yannicii RepID=UPI0002E99FBC similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 279.0
  • Bit_score: 470
  • Evalue 1.20e-129

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 852
TCCAACGCGAACACCATCATCATCGACCGTGCCGATAAGTACGGCCTGAGCCAGCTGCATCAGCTGCGCGGGCGAGTGGGACGCGGCCGGGAGCGGGCGTACGCCTACTTCCTCTACGACGAGATGAAGCCGCTCTCGGAGACCGCCGCCGACCGGCTGGAGACCATCGCCGTCAACAACGACCTCGGCAGTGGCATGCAGGTCGCTCTGAAAGACCTCGAGCTGCGCGGCGCGGGCAACCTGCTGGGCGCCGAGCAAGCCGGTCACATCGCCGGCGTCGGCTTCGACCTGTACCTGCGAATGGTGGGGGAGGCTGTGGCGGCCTTCCGCGGCGAGGCGGCCGAGGGCCCCGCGGAGCTGCGGCTGGAGCTGCCGGTGCAGGCGCGCCTGCCGGAGACCTACATCGACAGCGAGCGGCTGCGCCTGGAGGCGTACCAGAAGCTGTCGGCCGCCGCGAGCGTCGCGGCGAAGGACGACGCCATCGATCTGGTCGTCGACGAGCTGCGCGACCGGTACGGGGAGCTTCCCAGCGAGGCCTGGGGTCTGGTTGCCGTGGCGCGTCTGCGACGGCGTGCGGCGCAGGCGCAGCTGGCCGACGTCGTGGCGATGGGCCCCAATCTCCGGGTCGCGCCGGCGAACCTGGCGGACTCGATGCGCGTGCGGCTGCAGCGGCTCTATCCGAAGGCCAAGCTCGTCGCCGGGGGTGAGGCGGTCGTCGTGCCGCTGCCGAGCGCTGACGGCGAGCGCCTGGCCGACGCCGACCTCATCACGTGGGTGAGCCGCCTGCTGGATCAGCTCTGGCCGCTGCCCGAGCCGGAGCCGGCCGTGCCGGCCGGTGCCACGGCCTCCTGA
PROTEIN sequence
Length: 284
SNANTIIIDRADKYGLSQLHQLRGRVGRGRERAYAYFLYDEMKPLSETAADRLETIAVNNDLGSGMQVALKDLELRGAGNLLGAEQAGHIAGVGFDLYLRMVGEAVAAFRGEAAEGPAELRLELPVQARLPETYIDSERLRLEAYQKLSAAASVAAKDDAIDLVVDELRDRYGELPSEAWGLVAVARLRRRAAQAQLADVVAMGPNLRVAPANLADSMRVRLQRLYPKAKLVAGGEAVVVPLPSADGERLADADLITWVSRLLDQLWPLPEPEPAVPAGATAS*