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scnpilot_solids1_trim150_scaffold_42351_1

Organism: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

partial RP 26 / 55 MC: 1 BSCG 26 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..1021)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 340.0
  • Bit_score: 637
  • Evalue 1.30e-179
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FDA46 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 340.0
  • Bit_score: 638
  • Evalue 4.10e-180
rho; transcription termination factor; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 340.0
  • Bit_score: 628
  • Evalue 1.00e-177

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GAGATCGGCGAGGACGACGTGCTCATCCCGGTCGCCGGCATCCTCGACGTCCTGGACAACTACGCGTTCGTGCGCACGACCGGTTACCTGCCTGGCGCCAGCGACGTGTACGTCTCCCTCGGGCAGGTCAAGAAGTACAACCTGCGCAAGGGCGACGCGATCGTCGGTGCCATCAAGCAGCCGCGCGAGGGCGAGCAGTCCGGTCGGCAGAAGTACCACGCACTGGTCAAGGTCGACTCGATCAACGGCCTGAGCACCGAGGATGCCGCGACCCGCGTGGAGTTCTCGAAGCTGACCCCGTTGTACCCGCAGGAGCGGCTGCGCCTGGAGACGGCGCCGGAAAAGCTCACGCAGCGCATCATCGATCTGATCGCCCCGATCGGCAAGGGTCAGCGCGGCCTCATCGTGGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGATCAACAACCCCGAGGTGCACCTCATGGTCGTGCTCGTCGACGAGCGCCCCGAAGAGGTCACCGACATGCAGCGCACGGTCAAGGGCGAGGTCGTCGCCTCGACGTTCGACCGTCCCGCTGAGGACCACACCACGGTGGCCGAGCTTGCCATCGAGCGCGCCAAGCGTCTTGTCGAGCTGGGTCGCGACGTGGTCGTGCTGCTGGACTCGATCACGCGCCTCGGCCGTGCCTACAACGTGTCGGCACCCACCAGCGGACGCGTGCTCACCGGCGGTGTCGACGCCTCGGCCCTGTACCCGCCCAAGCGCTTCTTCGGCGCCGCGCGCAACATCGAGAACGGCGGCTCGCTGACGATCCTGGCGACCGCGCTGGTGGAGACCGGGTCGAAGATGGACGAGGTCATCTTCGAGGAGTTCAAGGGCACGGGCAACAGCGAGCTGCGCCTGTCGCGGCAGCTGGCCGACAAGCGCATCTTCCCGGCCGTCGACGTGAACGCGTCCAGCACTCGCCGTGAGGAGATGCTGCTGAGCCCCGACGAGGTCAAGATCACCTGG
PROTEIN sequence
Length: 340
EIGEDDVLIPVAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAIVGAIKQPREGEQSGRQKYHALVKVDSINGLSTEDAATRVEFSKLTPLYPQERLRLETAPEKLTQRIIDLIAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAINNPEVHLMVVLVDERPEEVTDMQRTVKGEVVASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNVSAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITW