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scnpilot_solids1_trim150_scaffold_13865_1

Organism: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Location: 1..1335

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 436.0
  • Bit_score: 705
  • Evalue 1.50e-200
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 436.0
  • Bit_score: 705
  • Evalue 6.50e-200
DNA-directed RNA polymerase subunit beta' n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9Y9_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 436.0
  • Bit_score: 705
  • Evalue 4.60e-200

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1335
TCAGGAACTGCTAAAACTGCTAAATTCCTTGATGATATCAAAGACTTAGGTTATCAGATGGCGTTCAGAGGAGGTTTGTCTTTCAATCTGGATGATATTATCGTTCCGAAAGAGAAAGATGAATTGATCAAAAGAGCAGAGGAGGATGTTGAAGAAGTGATGAATCACTACGGAATGGGACTTATCACCAACAACGAACGTTATAACCAGATCATTGACATCTGGACACATACGAACTCCAAGCTGACAAATACGCTGATGGATCAGCTGAAAAATGACAATCAGGGATTCAACTCTATTTACATGATGTACGACTCAGGAGCTCGTGGATCTAAAGAGCAGATTCGTCAGTTGTCAGGTATGCGTGGTTTGATGGCGAAACCTCAAAAATCAGGTGCTACAGCACAGGAAATTATTGAAAACCCGATCCTTTCCAACTTTAAAGAAGGACTGTCGATCCTGGAGTACTTTATTTCTACGCACGGTGCCCGTAAAGGTTTGGCGGATACAGCGTTGAAGACGGCCGATGCAGGTTACCTGACACGTCGTCTGGTGGATGTTTCCCAGGACGTAATCATCAATAAAGAAGATTGTGGTACTTTGAGAGGGCTTGTAGCTACATCATTGAAGAAAAATGATGAAATTGTTGAGCCGTTGAAAGACAGAATCGTTGGTAGAACGACAGTGAATGACATTTTGCATCCGGATACAAATGAGCTGATTTTGTCAAGTGGTGAGCTAATTACAGAGCCGATTGCTGATAAAATTGAAAAAGCAGGTATTGAAGAAGTGGAAATCCGCTCCGTACTTACTTGTGAGATGAGAAGAGGAGTATGTTCGAAATGTTACGGAGTTAACTTATCTACTCATCGCTTGGCACAGGAAGGAGACGCAGTAGGTGTTGTGGCTGCACAATCAATCGGTGAGCCGGGAACACAGTTGACGCTGCGTACGTTCCACGTCGGTGGTACAGCATCTAACACAACTGATATAAGTGACCTGAAAGCCAAAGTAAACGGTCGTCTGGAACTTGAGGAATTAAGAACTATCAAGACGGACGAAGGAAAAGTAATCGTGGTGGGACGTTCAGGTGAAGCAAGAATCCTTGATCCGAATACAGGAGCTATTTTAATGCAGGCAAACATTCCTTACGGTTCCGAATTGTTTATTACTGAAAGCGGAACGATCAATCGTGGTGATGTTATTGCGAAATGGGACCCGTATAATGCGGTGATCGTTTCTGAAGCAACAGGTAAAATCGTATTTGAAAGCATCGTTGAAGGTATTACATACCGTCAGNNNNNNNNNNNNNNNNNNNNGTCAGGAGGTGGATGA
PROTEIN sequence
Length: 445
SGTAKTAKFLDDIKDLGYQMAFRGGLSFNLDDIIVPKEKDELIKRAEEDVEEVMNHYGMGLITNNERYNQIIDIWTHTNSKLTNTLMDQLKNDNQGFNSIYMMYDSGARGSKEQIRQLSGMRGLMAKPQKSGATAQEIIENPILSNFKEGLSILEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIINKEDCGTLRGLVATSLKKNDEIVEPLKDRIVGRTTVNDILHPDTNELILSSGELITEPIADKIEKAGIEEVEIRSVLTCEMRRGVCSKCYGVNLSTHRLAQEGDAVGVVAAQSIGEPGTQLTLRTFHVGGTASNTTDISDLKAKVNGRLELEELRTIKTDEGKVIVVGRSGEARILDPNTGAILMQANIPYGSELFITESGTINRGDVIAKWDPYNAVIVSEATGKIVFESIVEGITYRQXXXXXXXSGGG*