ggKbase home page

scnpilot_solids1_trim150_scaffold_27398_4

Organism: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Location: 2097..2381

Top 3 Functional Annotations

Value Algorithm Source
conjugate transposon protein n=1 Tax=Flavobacterium rivuli RepID=UPI00035F4418 similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 95.0
  • Bit_score: 156
  • Evalue 1.00e-35
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54471.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 95.0
  • Bit_score: 163
  • Evalue 1.20e-37
type IV secretory pathway VirB4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 95.0
  • Bit_score: 153
  • Evalue 2.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium hibernum → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 285
ATGGAAAAGTGGTTGAAAGATGTTTTACCTGTTAAGGGCGTGGAACACGACTGTATCTTATCGAAGATGGGTGATGTAACGGTGGTGTACGAAGCCACACTGCCGGAGATCTTCACGCTTTCAGATCAGGAATACGAAGCGTTTCACCAGGCATGGATCAAAGCGGTCAAGGTGCTCCCTAAGCAATCCGTGTTTCATAAGCAGGACTGGTTTGTGGACAGCGCTTACGCTCCGGATTTCACGAAGGAGGACACGAGTTTTTTAACACGCAGCAGTGAACGTTTT
PROTEIN sequence
Length: 95
MEKWLKDVLPVKGVEHDCILSKMGDVTVVYEATLPEIFTLSDQEYEAFHQAWIKAVKVLPKQSVFHKQDWFVDSAYAPDFTKEDTSFLTRSSERF