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scnpilot_solids1_trim150_scaffold_35397_2

Organism: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38
Location: comp(883..1167)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IF61_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 93.0
  • Bit_score: 102
  • Evalue 2.30e-19
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 93.0
  • Bit_score: 102
  • Evalue 7.10e-20
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 93.0
  • Bit_score: 104
  • Evalue 6.40e-20

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Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 285
AAAAGAAAATCCATTTTTGAAGAAAAGGATGTGAGTGAATTTTCCTATAAGATCACTAATAATCAAAGTACAGATGGTGATCTGAGAGCAGACGATTTATTGAAAATGGTTCAGACGCTTCCGGATGGTTACCGGATTGTCTTTAACATGTTTGCTATAGAAGGATATTCACATAAGGAAATAGCTGAAATTCTCAATATTTCCGAAAACACTTCCAAATCACAATTTTTCAGAGCGAAAGCACTTTTAAGAACACAATTAGAAAAAATTGATTTTGAGAGATAA
PROTEIN sequence
Length: 95
KRKSIFEEKDVSEFSYKITNNQSTDGDLRADDLLKMVQTLPDGYRIVFNMFAIEGYSHKEIAEILNISENTSKSQFFRAKALLRTQLEKIDFER*