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SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

In projects: SCNPILOT_SOLID_1_TRIM150

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Curated version: solids_Flavobacteriales_1

Properties

Avg. coverage: 3.98 Longest contig: 8.96 Kbp Bin length: 1.35 Mbp GC content: 39.55 %

Contigs count: 814 Features count: 1745 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 15 / 55 BSCG 13 / 51 ASCG 2 / 38

Displaying items 801-814 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_34568 Species: Chryseobacterium soli (50%)	2	1189 bp	40.45	3.66	100.93
scnpilot_solids1_trim150_scaffold_14690 Species: Fluviicola taffensis (50%)	4	2195 bp	43.10	3.14	101.00
scnpilot_solids1_trim150_scaffold_33501 Species: Fluviicola taffensis (50%)	2	1216 bp	44.82	4.69	101.15
scnpilot_solids1_trim150_scaffold_29491 Genus: Chryseobacterium (66.67%)	3	1334 bp	44.38	4.95	101.42
scnpilot_solids1_trim150_scaffold_22013 Species: Chryseobacterium sp. JM1 (50%)	2	1646 bp	44.59	3.74	101.52
scnpilot_solids1_trim150_scaffold_20487 Species: R_Fluviicola_43_260 (66.67%)	3	1732 bp	41.45	3.29	101.67
scnpilot_solids1_trim150_scaffold_25622 Species: R_Fluviicola_43_260 (50%)	2	1478 bp	44.25	4.06	102.10
scnpilot_solids1_trim150_scaffold_17846 Class: Flavobacteriia (50%)	4	1906 bp	37.46	3.15	102.47
scnpilot_solids1_trim150_scaffold_13911 Genus: Flavobacterium (50%)	4	2280 bp	42.98	7.24	102.63
scnpilot_solids1_trim150_scaffold_41207 Species: R_Fluviicola_43_260 (50%)	2	1044 bp	39.18	2.01	102.87
scnpilot_solids1_trim150_scaffold_43516 Species: R_Fluviicola_43_260 (50%)	2	1003 bp	40.18	3.59	102.89
scnpilot_solids1_trim150_scaffold_28614 Species: Weeksella virosa (50%)	2	1362 bp	45.59	2.64	103.74
scnpilot_solids1_trim150_scaffold_38773 Species: R_Fluviicola_43_260 (66.67%)	3	1093 bp	37.51	2.74	105.67
scnpilot_solids1_trim150_scaffold_37704 Species: R_Fluviicola_43_260 (50%)	2	1115 bp	37.49	2.15	107.62

Displaying items 801-814 of 814 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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