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scnpilot_solids1_trim150_scaffold_14858_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(3..2177)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 725.0
  • Bit_score: 1416
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 725.0
  • Bit_score: 1307
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGM2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 725.0
  • Bit_score: 1416
  • Evalue 0.0

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2175
AGCGAAGTCGTCTATCTGTCGGCGATGGAGGAATCGAAGCACACGGTCGCGCAGGCGAACGCCGATCTCAACCCCGACGGCAGCTTCGTCGAGGAGCTGATCTCGGCGCGTGAAGCCGGCGAATTCCTGATGGCGCCGCGCGAACAGATCACGCTGATGGACGTGTCGCCGAAGCAGCTCGTTTCGGTTGCGGCCTCGCTCATTCCGTTCCTGGAAAACGATGACGCCAACCGCGCGCTGATGGGATCGAACATGCAGCGTCAGGCCGTGCCGTTGCTGCGGGCCGAAGCGCCCGTCGTCGGTACCGGCATGGAAGGCACCGTCGCACGCGATTCGGGCGCGGCCATCGCGGCACGCCGCGGCGGCATCATTGACCAGGTCGATGCGACGCGTATCGTCATCCGTGCGACCGACCTTGTCGAACCCGGCAAGTCGGGCGTCGACATCTATCGCCTCCAGAAGTTCCAGCGGTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACGTGATCCGCACCGGCGACATCATCGCCGACGGTCCGTCGACCGAGCTTGGCGAACTGGCGCTCGGCAAGAATGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAATTATGAGGACTCGATCCTCATTTCCGAACGCATCGTGAAGGACGACGTCTTCACCTCGATCCACATCGAGGAATTCGAAGTCACCGCCCGCGACACGCGCCTCGGGCCGGAGGACATCACGCGCGACATTCCGAACGTCGGCGAAGAAGCGCTCCGCAACCTCGACGAAGCGGGCATCGTCTACATCGGCGCCGAAGTCGGCCCGGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAAGAAAAGCTGCTGCGCGCCATCTTCGGCGAAAAGGCCAGCGACGTGCGCGACACCTCGCTTCGCTTGCCGCCTGGCGTGTCGGGTACGGTCGTCGAAGTCCGCGTCTTCAACCGTCACGGCATCGACAAGGATGAACGCGCGATCGCGATCGAACGCGAGGAAATCGAGCGTCTGAAGCAGGACGCCGACGACGAGCGCGCGATCCTCAACCGCGCGACCTTCTCCAGTCTCAAGGAACTGCTGGTCGGCCAAGCTACCAGCGCAGTGCCCAAGGGCATGAAGAAGGGCGACGTGCTGACCGAAGATCAGCTCGCCGAACTCGATCGCGGCGACTGGTGGAAGCTCGCGGTCGTCGACGACAAGGCGCAGGCCGCTCTCGAAGCGATCAAGGCGCAGTATGACGACGCGATCAAGCGGATCAACGCGAAGTATGAAGACCGCGTCGAAAAGCTGCAGCGCGGCGACGAACTCGCGCCGGGCGTGCTCAAGATGGTCAAGGTCTTCGTTGCCATCAAGCGCAAGCTGCAGTCGGGCGACAAGATGGCCGGCCGTCACGGGAACAAGGGTATCATCAGCCGCATCCTGCCGATCGAGGACATGCCGTTCCTCGAAGACGGCACGCATGTCGACGTGGTGCTTAACCCGCTGGGCGTGCCGTCGCGTATGAACGTCGGTCAGATCCTCGAAACGCACCTCGGCTGGGCATCGCGCGGTTTCGGCCGCCAGATTACCGCGGCGCTCGAAGATTGGCGTGCGGCAAACCCGAACCCCGAAGCGGGCGCGCCGCCCGAAGCGGTACGTGAGGCGCTGCTCACCGCCTATGGCGACGATTATGCCGACGACATCAAGGGTCGCAGCAATGATCAGATTGTCGAGATGGCGGGCCACCTGTCGCTCGGTATCCCGTTCGCGACGCCGGTGTTCGACGGCGCGCGCGAAGGCGATGTGTCGACGATGCTGGAACGTGCCGGTCTCGACCGGTCGGGTCAGGTCGATCTGTACGACGGCCGCACGGGCGATCGTTTCGACCGCAAGGTGACGGTGGGATATATGTATATCCTGAAACTCCATCACCTGGTCGACGACAAGATCCACGCGCGCTCGATCGGGCCGTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAAATGGAAGTGTGGGCGCTCCAGGCTTATGGCGCCGCCTACACGCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGATCGGCCGCACCAAGGTTTACGAAGCG
PROTEIN sequence
Length: 725
SEVVYLSAMEESKHTVAQANADLNPDGSFVEELISAREAGEFLMAPREQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRAEAPVVGTGMEGTVARDSGAAIAARRGGIIDQVDATRIVIRATDLVEPGKSGVDIYRLQKFQRSNQNTCINQRPLVKVGDVIRTGDIIADGPSTELGELALGKNVLVAFMPWNGYNYEDSILISERIVKDDVFTSIHIEEFEVTARDTRLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVGPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVSGTVVEVRVFNRHGIDKDERAIAIEREEIERLKQDADDERAILNRATFSSLKELLVGQATSAVPKGMKKGDVLTEDQLAELDRGDWWKLAVVDDKAQAALEAIKAQYDDAIKRINAKYEDRVEKLQRGDELAPGVLKMVKVFVAIKRKLQSGDKMAGRHGNKGIISRILPIEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLGWASRGFGRQITAALEDWRAANPNPEAGAPPEAVREALLTAYGDDYADDIKGRSNDQIVEMAGHLSLGIPFATPVFDGAREGDVSTMLERAGLDRSGQVDLYDGRTGDRFDRKVTVGYMYILKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVIGRTKVYEA