ggKbase home page

scnpilot_solids1_trim150_scaffold_19809_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(3..284)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 188
  • Evalue 4.30e-45
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 94.0
  • Bit_score: 177
  • Evalue 1.70e-42
Diaminopimelate epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU61_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 94.0
  • Bit_score: 188
  • Evalue 3.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCGGACCGCTTCACCAAGATGCATGGCCTCGGCAACGACTTCGTCGTGATCGATGCGCGCGCGAAAAGCGTCGAGATGACGCCGGCGCGGGCGCATGCGATTGCCGATCGCCGCCACGGCATCGGCTGCGACCAGCTTATCCTGCTCGAACCGTCGTCGAAGGCCGACGTCAAAATGCGTATCTTCAACGCCGATGGCAGCGAGGTCGAGGCGTGCGGCAATGCGACGCGCTGCGTCGCCACGCTGATCGGCAAGCCCGCAGTCATCGAAACGCTGGGC
PROTEIN sequence
Length: 94
MADRFTKMHGLGNDFVVIDARAKSVEMTPARAHAIADRRHGIGCDQLILLEPSSKADVKMRIFNADGSEVEACGNATRCVATLIGKPAVIETLG