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scnpilot_solids1_trim150_scaffold_27362_3

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: comp(1252..1476)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=2 Tax=Sphingopyxis RepID=RS18_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 149
  • Evalue 1.70e-33
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 149
  • Evalue 5.20e-34
30S ribosomal protein S18 {ECO:0000255|HAMAP-Rule:MF_00270}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 149
  • Evalue 2.30e-33

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGCACGACCCTTTTTCCGTCGCCGCAAGACCTGCCCCTTCAGCGCGAAGGACGCACCGGTCATCGATTACAAGGACGTCCGCCTGCTCCAGGGTTACCTGTCGGAGCGCGGCAAGATCGTCCCGTCGCGGATCACCGCGGTGTCCACCAAGAAGCAGCGCGAGCTGGCGAAGGCGATCAAGCGCGCCCGTCACATCGGCCTGCTCCCCTACATTGTGAAGTAA
PROTEIN sequence
Length: 75
MARPFFRRRKTCPFSAKDAPVIDYKDVRLLQGYLSERGKIVPSRITAVSTKKQRELAKAIKRARHIGLLPYIVK*