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scnpilot_solids1_trim150_scaffold_45524_2

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 555..818

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WA53_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 165
  • Evalue 3.40e-38
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 87.0
  • Bit_score: 165
  • Evalue 4.80e-38
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 87.0
  • Bit_score: 149
  • Evalue 6.10e-34

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGCCAATACGCCGCAGGCAAAAAAGCGCATCCGTCGCAACAGCGCGCGCACGCTGATCAACAAGAATCGCGTGTCGCGCATCCGCACGCTCGTGAAGAAGGTCGAAAACGCGGTTGCCGCCGGCGACAAGGCCGCCGCGACTGCAGCGCTCGCAGCGGCGCAGCCCGAAATGGCGCGCGGCGTTGCCAAGGGCGTCCTCCACAAGAACACGGTTGCGCGCAAATATTCGCGCCTGACCAAGAGCGTGAACGCGATCGCCTGA
PROTEIN sequence
Length: 88
MANTPQAKKRIRRNSARTLINKNRVSRIRTLVKKVENAVAAGDKAAATAALAAAQPEMARGVAKGVLHKNTVARKYSRLTKSVNAIA*