ggKbase home page

scnpilot_solids1_trim150_scaffold_43608_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingopyxis_65_37

partial RP 38 / 55 BSCG 38 / 51 MC: 1 ASCG 4 / 38
Location: 3..671

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXC0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 215.0
  • Bit_score: 368
  • Evalue 4.00e-99
TonB-dependent receptor {ECO:0000313|EMBL:ENY82899.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 215.0
  • Bit_score: 368
  • Evalue 5.50e-99
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 215.0
  • Bit_score: 306
  • Evalue 5.80e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
TATCGCACCAAATACAAGGATCTGCAGGTCAACATCTTCGACGGGACGCTCAACTTCAACGTCCGCAATGCGGCGGCGGCGCGGACGCAGGGGATCGAAGCGGATTTTCGCGCGGCGCTCGCCGAAGGCCTGACCATCAGCGGCGCGATCGCCTATCTCGATTTCAAATTCACCAACTTCACCGACGGCCAATGCTATTATCTGCAGACGCCGGGACCGGGTGGCTTCTGCGACTATAGCGGCAAGCGTAACGCGCTGAGTCCGAAATGGTCGGGTAATCTCAACGTCGATTACTGGACGCCGGTCGGCAGCGACCTCAAGCTGTCGTTCAACGTCAACGCCGACTTTTCCTCCTCCTATATCGCGGCGGCGAATCTCGACCCGCGGACCTATCAGGGCAGCTATGCGAAGCTTGGCGCCCGCATCGCGCTGGGGCAGATCGACAATCGCTGGGAAGTGGCGCTGATCGGCCGCAATCTGACCGACCAGCGGATCCTTCAGACCGGCAGCGCGATGCCGCTTGCGACGACGATNNACGGGGCGCTTTTGAACCAGCTCTCCCCCGACGGAAGCATGGGCGCGGGCACCGCCCATCTTCCGGCGGACCGGCCTTGTCGCGTGCTGTTCCGCGGAGTAGGGCGGGCGCAGCAATGGACGCATCAGCCGTGA
PROTEIN sequence
Length: 223
YRTKYKDLQVNIFDGTLNFNVRNAAAARTQGIEADFRAALAEGLTISGAIAYLDFKFTNFTDGQCYYLQTPGPGGFCDYSGKRNALSPKWSGNLNVDYWTPVGSDLKLSFNVNADFSSSYIAAANLDPRTYQGSYAKLGARIALGQIDNRWEVALIGRNLTDQRILQTGSAMPLATTXXGALLNQLSPDGSMGAGTAHLPADRPCRVLFRGVGRAQQWTHQP*