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scnpilot_solids1_trim150_scaffold_651_8

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(6804..7481)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2826580 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 178.0
  • Bit_score: 191
  • Evalue 1.10e-45
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 183.0
  • Bit_score: 169
  • Evalue 1.10e-39
Tax=GWF1_Xanthomonadales_69_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 181.0
  • Bit_score: 191
  • Evalue 9.40e-46

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Taxonomy

GWF1_Xanthomonadales_69_6_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCATGTCGATACATCGACGAGCCATGACGCAGCCGTGCGGATGCAGGGGCCCGGCCCGCTGGCACGACATCGACAGACCCTGATCGTGGACACCCCGTCGACCTTCCGGCAACACGTCGAGCCCGACCTGATCGAGCGCTTCAAGCGTGGCGATCTCGCGGCGTTCGAATCGGTCTACCGGCGCTTCGAACGCGCAGCCTGGACGCTGGCGTTGCGCCTGACGGGCCGCCGCGACGTGGCGCAGGAAGCCTTGCAGGATTCCATGCTGAAAGCCTTCGAACGCGCGCGCCAGTTCCGCGGCGAAGCGCCATTCGGCGCATGGCTGCGCAAGCTGGTGGTGAACGAGGCGCTGATGCAGTTGCGCCACGACCGCCTGCACATCATCGAGGTGTTCGACGAAGACCTCCGCGGCGACGACGACGCACCGCCGCCGTGGCTGCTGGCCGACGCCGCCGCGCTGGATCGCGCCCTGAATCGCCTGCCCGATGCAGCGCGCGTGGTGCTGTGGCTGTACCACGTCGAAGGCTTCACCCACATCGAGATCGCCGAGCAGTTCGGACGCTCGACCAGCTTTTCCAAATCGCAACTCGCGCGCGCGACCAGGCGCCTGCGCGAACTGCTCATTCCCCAAGTGGAGGACACGCCATGCACGACCGGCTCGACCACCACGGCATGA
PROTEIN sequence
Length: 226
MHVDTSTSHDAAVRMQGPGPLARHRQTLIVDTPSTFRQHVEPDLIERFKRGDLAAFESVYRRFERAAWTLALRLTGRRDVAQEALQDSMLKAFERARQFRGEAPFGAWLRKLVVNEALMQLRHDRLHIIEVFDEDLRGDDDAPPPWLLADAAALDRALNRLPDAARVVLWLYHVEGFTHIEIAEQFGRSTSFSKSQLARATRRLRELLIPQVEDTPCTTGSTTTA*