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scnpilot_solids1_trim150_scaffold_1363_9

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 9279..9581

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXB8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 99.0
  • Bit_score: 176
  • Evalue 1.30e-41
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 99.0
  • Bit_score: 176
  • Evalue 1.80e-41
integration host factor, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 96.0
  • Bit_score: 168
  • Evalue 1.50e-39

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGACGCTGACCAAGGCAGAGATGGCCGAGCGCCTGTTTCTCGACGTGGGCCTCAACAAGCGTGAAGCCAGGGAGTGCGTGGACGCCTTCTTCGAGGTGTTGCGCGAGGCGCTCGAGCGGGGGGAGCCGGTCAAGTTGTCGGGGTTCGGCAACTTCGACCTGCGCAACAAGAATCAGCGGCCCGGACGCAACCCCAAGACCGGCGAGGAGATTCCGATCTCCGCGCGCCGTGTCGTGACGTTTCGCCCGGGGCAGAAGCTGAAACTGAGGGTCGAGAACCATGCTGGATCAGGGCAGCAATAA
PROTEIN sequence
Length: 101
MTLTKAEMAERLFLDVGLNKREARECVDAFFEVLREALERGEPVKLSGFGNFDLRNKNQRPGRNPKTGEEIPISARRVVTFRPGQKLKLRVENHAGSGQQ*