ggKbase home page

scnpilot_solids1_trim150_scaffold_2850_2

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(572..2038)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 491.0
  • Bit_score: 647
  • Evalue 1.40e-182
UDP-N-acetylmuramyl-tripeptide synthetase (EC:6.3.2.13) similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 494.0
  • Bit_score: 616
  • Evalue 9.80e-174
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E638D0 similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 488.0
  • Bit_score: 642
  • Evalue 3.10e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oleiagrimonas soli → Oleiagrimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGAACGCGATGCGCCTCGACGATTTGCTGCGCGGCATCGCAACGCCGGAGCATGGCGATATCGTGGTGTCGGGCCTGACCCAGGACTCGCATGCCGTGCACGCGGGTGATGCTTTCGTGGCGCTTGCGGGCGCGAAGCACCACGGGATCGAATTTGCACCGGCGGCGCTTGCGCAAGGCGCGGTGGCGGTGCTGGCCGAAGCGCCGCATTCCGGAAAAGTCCCCGCCAAACCCGTGGTCTGGATCGATGGCCTGCGCGCCCGCCTCGGCGGCATCGCCGCGCGGTTCTACGGCGATCCGTCCGCCGCGATGGAAGTGATCGGCGTCACCGGCACCAGCGGCAAGACCTCGACCGTGCAGCTGCTGGCGCAGGCGTTGACGCAGCTAGGCAAGCGCACGGCCACGATCGGCACGCTCGGCGCCGGCCTGCACGGTGCGTTGCATGCGGGCGAACGCACCACCCCCGACGTGATCCGGGTGCACGGGCTGATGGCGGAATTCCACGCCGCCGGCGCCACCCACGTCGCGATGGAAGTGTCCTCGCACGCGCTCGACCAGCAGCGCGTGGATGGCGTGCACTTCGACATCGCGGTGTTCACCAACCTCACCCGCGACCACCTCGATTACCACGGCACGATGGAGGCCTACGGCGCAGCCAAGGCCAGGTTGTTTGCCTGGCCGGGCTTGCGCGCGGCGGTGATCAACGTCGACGACGCGTTCGGGCGCGAATTGGCCCGGGAGCTGCCGGGCGGCGTGGAGAAATTGCGTTGCGCAATCGGCGGTGACGATGCCGAACTGCATGCGCGCAACGTGCATACGCATTCCGACGGCATCGATTTCGAACTCGAAACGCCGTGGGGCAGCGGGCTGCTGCGCAGCCGACTGCTGGGGCGTTTCAACGTCGCCAACCTGATCGCCGTGGCGGGCGTGCTCGGCGCGCTGGGCGTTCCGTTCGCGCGGATCACGGCGGCACTCGAGGCGCTGGAGCCGGTTGCCGGCCGCATGAATCGCCTGGGCGGCGGCCCATCGCCGCTGGTGGTGGTCGATTATTCGCACAAGCCGGACGCACTGGAGCAGGTGCTGGCGACGTTGCGCGAACATTGCGAAGGCGAACTGGTCTGCGTGTTCGGCTGCGGCGGCGAGCGCGACGCCGGCAAGCGCCCGCTGATGGGCGCGATCGCCGAACGCCTTGCCGATACGGTCATCGTCACCGACGACAACCCGCGCGGCGAGGACGGCGATGCGATCGCGGCGCAGATCGTCGCCGGCATGCAGGCACCGGATCGCGCCGTGGTGGAGCGTGACCGCGCGCGCGCGATCGCTTTCGCCATCGGTCGCGCGCAAGCGGGTGACGTGGTGCTGGTCGCCGGCAAGGGTCACGAGACCTATCAGGAAATCGCCGGCGCCAAGCGCCCGTTCGATGACCTCACGATGGCGCGCGCCGCCCTGGAGGCGCACGCATGTTGA
PROTEIN sequence
Length: 489
MNAMRLDDLLRGIATPEHGDIVVSGLTQDSHAVHAGDAFVALAGAKHHGIEFAPAALAQGAVAVLAEAPHSGKVPAKPVVWIDGLRARLGGIAARFYGDPSAAMEVIGVTGTSGKTSTVQLLAQALTQLGKRTATIGTLGAGLHGALHAGERTTPDVIRVHGLMAEFHAAGATHVAMEVSSHALDQQRVDGVHFDIAVFTNLTRDHLDYHGTMEAYGAAKARLFAWPGLRAAVINVDDAFGRELARELPGGVEKLRCAIGGDDAELHARNVHTHSDGIDFELETPWGSGLLRSRLLGRFNVANLIAVAGVLGALGVPFARITAALEALEPVAGRMNRLGGGPSPLVVVDYSHKPDALEQVLATLREHCEGELVCVFGCGGERDAGKRPLMGAIAERLADTVIVTDDNPRGEDGDAIAAQIVAGMQAPDRAVVERDRARAIAFAIGRAQAGDVVLVAGKGHETYQEIAGAKRPFDDLTMARAALEAHAC*