ggKbase home page

scnpilot_solids1_trim150_scaffold_880_1

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 1..2796

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 786.0
  • Bit_score: 1151
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Dyella japonica RepID=UPI00030EAB37 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 788.0
  • Bit_score: 1140
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 792.0
  • Bit_score: 1136
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2796
ACGATGGGGACGATCCTGCGCCACGGCTCCGAAGAGCAGAAGCGTGCCTATCTGCCAAAGATCGCGACCGGCGAACTGCGCCTGCAGGCCTTCGGCGTCACCGAGCCGACGAGCGGCACCGACACCACCGCCCTGCGCACCGTGGCGGTCCGTGAGCCTGCTCCGTCGAAGGACGGGGGCGACGATTATGTCGTCAACGGCCAGAAGATCTGGACCAGCCGCGCCGAGCACAGCGACCTGATGCTGCTGCTCGCGCGCACCACGCCCCGCGACCGGGCCGCGAAGAAAACCGACGGCCTTTCGACCTTCATCGTCGACATGAAGGCGGCGCTCGCCGACGGTTCGCTGACGATCCGGCCGATCCGCACGATGATGAACCATGCGACGACCGAGATTTTCTTCGACAACATGCGCATCCCGGCGGCCAACCTGCTGGGAGAGGAAGGGAAAGGCTTTCGCTACATCCTGTCGGGCATGAATGCCGAACGCGTGCTGATCGCCGCCGATTCACCCGGCCGCCGCGAGGCTTTGCTGGAACAATTGAGTGCGGTCGAGATGCAGCCGCAAATCGTCGACGGCTGGCCGGCGTTCCTCGGCAAAGGGGGACCGCTGTCCATCACCAGCGCACCGCTGGAGCGCGGATTCACCCTGACGCAACCGCCCATCGCGGTCTTCACCGAGCGCGAACTCGCGGGTGAACGCGCACGCAGCGAACGCCAGCGCCGCCGCGTCGCCGAGCGCGATCCCGAAGCCATCCTGCGCGATCTTTCCGAACTCGAGATCGGCGCGCCGATCGTGCACGTCGACCACGGCGTCGGCCGTTACCTGGGCCTGGTCGCGCTGGATGTCGGCGGCATGCCCGGCGAATTCCTCGCCATCGAATACGCACGCGGCGACAAGCTGTACGTGCCGGTCGCGCAACTCGCGCTGGTCAGCCGCTACAGCGGCGCCGACGACGAACACGCGCCGCTGCATTCACTCGGCGGCGAAAGTTGGGAACGCGCCAAGCGCAAGGCCGCCGGGAAAGTCCGCGACGTCGCCGCCGAACTGCTGGCGATCCACGCGCAACGCGCGGCGCGCCAGGGCAACGCCATCGACATCGACCGCAGCATGCTGGCGCGTTTCGCGGAAGGCTTCCCGTTCGAGGAAACCCCCGACCAGCAGGCCGCGATCGATGCGGTGCTGGCCGACCTCGAAGCAAGGCAGCCGATGGACCGCGTGGTCTGCGGCGATGTCGGCTTCGGCAAGACCGAGGTCGCGTTGCGCGCCGCGGTCGCCGCGGCCAGCGCCGGCAAGCAGGTCGCGGTGCTGGTGCCGACCACCCTGCTCGCCCAGCAGCACTACGACAATTTCCGCGACCGGCTGGCGGATTTTCCGATACGGGTGGAACTGCTGTCGCGCTTCCGCGCGAAAAAGGACGCGGACGATGCGTTGAAGCGGCTCGCCGACGGCAAGCTCGACATCGTGGTCGGCACCCACAAGCTGCTGCAACCGGACGTGAAATTCAAGGACCTCGGCCTCGTGATCGTGGACGAGGAACACCGCTTCGGCGTGCGCCACAAGGAACAGTTGAAGAAACTGCGTGCCGAAGTGGACCTGCTCACGCTCACCGCGACGCCGATTCCGCGCACCCTCAACATGGCCATGAGCGGCATGCGCGACCTTTCGATCATCGCGACGCCGCCGGCAGCACGCATGGCGGTGAAAACCCTGGTCGCGCAATACGATCCTGCGTTGGTCCGCGAAGCCTTCCAGCGCGAACTGGCGCGCGGCGGCCAGGTGTATTTCCTGCACAATTCCATCGACAGCATCCAGCGCGTCGCGCGCGAACTCGGGGAGCTGGTGCCGGATGCGCGCATCCGCGTCGCGCACGGCCAGATGTCGGCGCACGAACTGGAACAGGCGATGCTGGATTTCCACCGCCAGCGCTTCAACGTGCTGGTGTGCACCACCATCATCGAATCCGGCATCGACGTGCCGACCGCCAACACCATCGTGATCGACCGCGCCGATCGCTTCGGGCTCGCGCAGTTGCATCAGTTGCGCGGGCGCGTCGGCCGCTCGCACCACCGCGCCTACGCGTACCTGATCGTTCCCGACAGGAATGCCATCACCGCGGATGCCGAAAAACGCCTCGCCGCACTGGAGTCGCTGGAGGAACTCGGCGCCGGTTTCACGCTCGCCACCCACGACATGGAAATCCGCGGCGCCGGCGAGTTGCTCGGCGAAGCGCAATCCGGCCAGATCGAGGCGATCGGCTTCGCGTTGTACAACGACTTGCTGGAACGCGCGGTACGCGCGTTGCGCTCCGGCAAGGTGCCTGACTTCGACCTCGGCGGCGACACCGGCACCGAGATCGAGCTGCACTTGCCCGCGCTGATCCCGGACGACTACCTGCCCGACGTGCACGCGCGCCTGACGCTGTACAAGCGCATCGCCAGCGCGACCGAAGACGAAGGGTTGCGCGACCTGCAGGTCGAGATGATCGACCGCTTCGGCTTGCTGCCGCAGGCGACGAAGAACCTGTTCGCGATCGCCTCGCTGAAGCTGCGCGCGCACGCCCTCGGCATCCGCAAGCTCGACCTCGGCGCCGCCGCCGGACGCATCACCTTCCGCGCCAAGCCCGATGTCGACCCCGCCACCATCATCCGCCTGATCCAGAAGCAACCGCGCGTCTACAAACTCGACGGCCAGGACAAGCTGCGCATCGCGATGGAGTTGCCGGAGCCCGCCGACCGCCTGCGCATGGCCGGCGAATTGCTGGAAACGCTGGCGGCAAGGGCCATGGCGGCATGA
PROTEIN sequence
Length: 932
TMGTILRHGSEEQKRAYLPKIATGELRLQAFGVTEPTSGTDTTALRTVAVREPAPSKDGGDDYVVNGQKIWTSRAEHSDLMLLLARTTPRDRAAKKTDGLSTFIVDMKAALADGSLTIRPIRTMMNHATTEIFFDNMRIPAANLLGEEGKGFRYILSGMNAERVLIAADSPGRREALLEQLSAVEMQPQIVDGWPAFLGKGGPLSITSAPLERGFTLTQPPIAVFTERELAGERARSERQRRRVAERDPEAILRDLSELEIGAPIVHVDHGVGRYLGLVALDVGGMPGEFLAIEYARGDKLYVPVAQLALVSRYSGADDEHAPLHSLGGESWERAKRKAAGKVRDVAAELLAIHAQRAARQGNAIDIDRSMLARFAEGFPFEETPDQQAAIDAVLADLEARQPMDRVVCGDVGFGKTEVALRAAVAAASAGKQVAVLVPTTLLAQQHYDNFRDRLADFPIRVELLSRFRAKKDADDALKRLADGKLDIVVGTHKLLQPDVKFKDLGLVIVDEEHRFGVRHKEQLKKLRAEVDLLTLTATPIPRTLNMAMSGMRDLSIIATPPAARMAVKTLVAQYDPALVREAFQRELARGGQVYFLHNSIDSIQRVARELGELVPDARIRVAHGQMSAHELEQAMLDFHRQRFNVLVCTTIIESGIDVPTANTIVIDRADRFGLAQLHQLRGRVGRSHHRAYAYLIVPDRNAITADAEKRLAALESLEELGAGFTLATHDMEIRGAGELLGEAQSGQIEAIGFALYNDLLERAVRALRSGKVPDFDLGGDTGTEIELHLPALIPDDYLPDVHARLTLYKRIASATEDEGLRDLQVEMIDRFGLLPQATKNLFAIASLKLRAHALGIRKLDLGAAAGRITFRAKPDVDPATIIRLIQKQPRVYKLDGQDKLRIAMELPEPADRLRMAGELLETLAARAMAA*