ggKbase home page

scnpilot_solids1_trim150_scaffold_2262_3

Organism: SCNPILOT_SOLID_1_TRIM150_Xanthomonadales_66_9

near complete RP 45 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(2033..2527)

Top 3 Functional Annotations

Value Algorithm Source
cupin n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000362924F similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 158.0
  • Bit_score: 130
  • Evalue 1.80e-27
Germin-like protein subfamily 2 member 2 similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 145.0
  • Bit_score: 128
  • Evalue 2.70e-27
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 165.0
  • Bit_score: 129
  • Evalue 5.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAACATGCACTGGCGCTTGGCGATACCCTTGGCGTGCTTGCTTGGATTCGCAGCGGGAATGACCGCTGCGATGGCCCAGGCGCCCGCACCGACGGATCGCACCGTGCTCGCCCCCGATGAATTGAAATGGATGCCGGCGCCGCCGGTGCTGCCGAAGGGTGTGCAGATCGCGGTGTTGAGCGGCAACCCCTTCGCGGAAGGTTTTTCGGTTGTGCGTCTGAAAATTCCGCCGCACACGACGTTTGCGCCGCACTGGCATCCGGCCGCGGAAAACTTCAGCGTGCTGCGTGGAATGGTTTACCCCGGCATGGGCGACAAGGTGGACAAGTCGAATGCCAAGGCGCTGCCGCCGATGGGGTTTGCATCGCTCCCGGCAATCCACCCTCACTGGGTTTACAGCGGCGACGAGGAAGTCGTGATCGACTTGAGCTTCTACGGGCCGTTCCAGATCCACTACGTCAATCCAGCCGACGATCCGTCGGCAACGCAATGA
PROTEIN sequence
Length: 165
MNMHWRLAIPLACLLGFAAGMTAAMAQAPAPTDRTVLAPDELKWMPAPPVLPKGVQIAVLSGNPFAEGFSVVRLKIPPHTTFAPHWHPAAENFSVLRGMVYPGMGDKVDKSNAKALPPMGFASLPAIHPHWVYSGDEEVVIDLSFYGPFQIHYVNPADDPSATQ*