ggKbase home page

scnpilot_solids1_trim150_scaffold_823_19

Organism: solids_Mitochondria_Protozoa_1

partial RP 16 / 55 MC: 6 BSCG 7 / 51 MC: 3 ASCG 0 / 38
Location: 12780..13139

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S13, mitochondrial n=1 Tax=Acanthamoeba castellanii RepID=RT13_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 202
  • Evalue 2.60e-49
Ribosomal protein S13, mitochondrial; TaxID=5755 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii (Amoeba).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 202
  • Evalue 3.70e-49
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 106.0
  • Bit_score: 80
  • Evalue 4.80e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 360
ATGAAAAGTTTACAAAATTTTAATACGTTTGCATCGAATAATAAAAATAAAAATGTCTTTAGTGCATTGAAAAGTATTCACGGTTTAAATTTAAGAAAAATTAATAAAATAGTTTTAATGGTGGGGGCTGATATGTTTGAAAAAGTTAACAATGTGAATGTTGAAACCTTTTCATTAATAAAAAAACAAGCTATCTTTTTTTATAACTTGGAAGAAAATAAAATATTTAATAACATTAATAAAAAAAAAAAACTAAAAAATTATGTAGGAATGCGTCATATATTAAGATTGCCGGTTAGGGGACAAAGAACACACACTAACGCAAAAACTCCTAAAAAAAATATAAAAAGAGAATTATAA
PROTEIN sequence
Length: 120
MKSLQNFNTFASNNKNKNVFSALKSIHGLNLRKINKIVLMVGADMFEKVNNVNVETFSLIKKQAIFFYNLEENKIFNNINKKKKLKNYVGMRHILRLPVRGQRTHTNAKTPKKNIKREL*