ggKbase home page

scnpilot_solids1_trim150_scaffold_726_5

Organism: SCNPILOT_SOLID_1_TRIM150_Virus_3

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(1698..2156)

Top 3 Functional Annotations

Value Algorithm Source
Subunit common to RNA polymerases I, II, and III {ECO:0000313|EMBL:ESW98333.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ESW98333.1};; TaxID=871575 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea.;" source="Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560); (Yeast) (Hansenula polymorpha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 148.0
  • Bit_score: 70
  • Evalue 2.10e-09
DNA-directed RNA polymerases I n=1 Tax=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) RepID=E7R5U2_OGAPD similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 148.0
  • Bit_score: 70
  • Evalue 1.50e-09
hypothetical protein; K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 similarity KEGG
DB: KEGG
  • Identity: 29.3
  • Coverage: 147.0
  • Bit_score: 64
  • Evalue 3.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ogataea parapolymorpha → Ogataea → Saccharomycetales → Saccharomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 459
GTGAAAATGAGTGATGTTGAGGATGATTTTGCCGATAACGTTGATCGAGATGCAAGTGATGATGAAGATTTAACTGATGTTGAGGAAGAAGATAATTTACCTGATACAGCGGATACATTTGCTGAAGATACATTACTTAATAATCACAACATTGCCGAAGTTGTGGTCGTGAATGCAAATGAACGCTTAATGCCCGATGTATTAAGCAAATATGAAATTGCCGAAATAATCAATATTAGAACATATCAAATCAACAGTAATGGTATTGCTTTTTGCGATATTAGTGGATTGGATAATTCCGTTGATATCGCTAAACGCGAATTAATGCACCGTAAATGCCCACTTATGATTCGACGTGAAGCCGGTAGAGAGCTATCAAAAGATGGTAAACGTGTGATTATTAATGTTGAAGATTGGAATCCTAATGAAATGATCTTTGCCGCTCATTTTAATGTGTAA
PROTEIN sequence
Length: 153
VKMSDVEDDFADNVDRDASDDEDLTDVEEEDNLPDTADTFAEDTLLNNHNIAEVVVVNANERLMPDVLSKYEIAEIINIRTYQINSNGIAFCDISGLDNSVDIAKRELMHRKCPLMIRREAGRELSKDGKRVIINVEDWNPNEMIFAAHFNV*