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scnpilot_solids1_trim150_scaffold_108_18

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 11517..14051

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirB4 component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8X8_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 838.0
  • Bit_score: 1426
  • Evalue 0.0
  • rbh
Type IV secretory pathway VirB4 component {ECO:0000313|EMBL:AJA09636.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 841.0
  • Bit_score: 1551
  • Evalue 0.0
traC; type IV secretory pathway VirB4 component; K12063 conjugal transfer ATP-binding protein TraC similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 838.0
  • Bit_score: 1426
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2535
GTGAAGGCGCCCGGGACGCGAACGGGCGGCGGCCTCACCTTTGCCGACCTCCATCGCGGCGTCGCGCGCGACCGTTATTCGGACTTCCTGCCGCTCGTAGCGTGGGTCGAGGAAGAGGAAGCCTTTCTCTGCATCGACGACGGCTGGGGCTATGCCTGGGAACTGACGCCCGCGGCCTATATGTTCGCGCATGTCCACCAAGCCCTTCTCGGTCTGCTCAATATCCAGTTCCCCGAGAACAGCGTCGTCCAGCTCATCAGCTTCGCCGACCCGCTGATCGCGCCCGCGCTCGACCAATATCTCGATCTCAAGACGCGGCCCGATCCGCTGATCCAGGCTTCGGCGCGGCGAACCCATGCCTATCTCAACGAAGGGCGAAATGGTCTCGCCGCGCTTCACGGCATCCCCGTGCGCGATTTCCGGACCTTGCTTGCCGTCAAGACGCGCGCGCCGATGCACAGCGACCTTCGCCGCCAGATCGAGGAGCAGCTTGCCAAGCTCGGTATCCGCCGCCTCGAGCCCGAAGAAATGGTCGCCTTCTATCGGCGCATCTTCAATGGCGTCTTCGACGCCGCGCCCGGCGTCTACGCCACGGCTGCAGCCGCCCACGCGGCGCCGCCGATCCGCAAGCAGATCATCGATGCCGGCCCCGATCTCGCGTTCGATGGTCCGGAAGTCTTTCTCGGCAACCAGGTCGCGCGCTGCCTGACGCCGAAAGCACCGGCGCGGCGCGTCACCGCGGAGCGCGCCAACCGGTTGACAGGCGGGATGCGGGGGAGTGCCGAGGACAGCGACCAGATCGGCGGGCCCTTCCTCTATTGCCTCAACATCCTCTTCGACCATTCGCAGTTCGAGATTCACAAGCGCGCGCAGATCCTCTCGGCGCAGAAAGCCGCGGGAAGCTTCGCGGTCGAGGTCGGCAAGCAGATCGAGGAGATCGGCTGGGTACTCGACGAGGCAGGCAACAGCCGCTTCGTCTCGGTGATGCCCTGCGTCTGGGTGTTCGGCCGCGACCGCCACCAGGCGCGCGAGATGGCCGCGCGCGCGAAGCGCCTCTGGGAAAGCGAGCCGCTCCCCTGGATGGTGCAGGAAGAATCCTACCTCAATCCCATCCTGCTCACCGCGAGCCTGCCGTTCGGCCTCTATCCCGAACGCCGGACGATCAGGATGCTCGAGCGCGATTTCAAGATGCCGGTGAAGGCGACTGCCCTGATGGCGCCGATCCAGACCGATTTCCGCGGCGGCGGCCGCCCTGCCCTGCTCTACACCGGACGCAAGGGCCAGCTCATCACGCTCGATCTCTTCGACCCGCGCATCAACAATTATAATTTCATCGTCGCGGCCGAAAGCGGCGCCGGCAAGAGCTTCCTGCTCAATGACCTTTGCCGCCAATATTTCGCGCAGAACGCGCTGATCCGCATCATCGATATCGGCGGCAGCTACCGCAAGCTCTGCACCCTCTGTTCGGGCCGTTATATCGACGTCGGTGAGGAACGGCTCGTTCTCAACCCCTTCGATCTCGGGCTTGCGCTCGACGGCGAGGACAAGCAGTCGGCGATCGCGATGGCGGTCGCGATCGTCGCCGAGATGGCGAATGCCGCGACGCGCAAGGGTGTCTCGACCTCGGAATGGAACCTTATCAAATCGGCGGTCCAGTGGACGATCGACGAGGGCCATGCCGACGAAGGCATCGATTCCGTCCGTGCGTGGCTCGGCGCCTATCCGCAATTTGCCGCAGCCGACCTCGACCGCGTCGACCATCTGAAGCCAGTCGCCCGCGAACTCGCGTTCAACCTGCGCGATTTTGGGTCGGACGGAGCCTATGGGCATTTCTTCAATGGGCCGTCGACCTTCGACATCAGCTCGGACGAGTTCGTCGTGCTCGAACTCGAACGCCTGAAAGCCATACCCGACCTGTTCAACGTGGTCGTGATGGTCGTGATCAACGCGGTGACGCAAGAGCTCTACCTCTCGGCCCGCGATCGCCCGCGATTCGTGATCTGCGACGAAACCGCGCAGTTCATGCCCAACAACCCGGGCCAGGATTTGTCCCGCCTCGCCGAAGCCATCGCCCAGGGCTATCGCCGCGCGCGCAAATATCGGGGCAGTTTCGGTATCATTCTCCAGAGCATGAACGACCTTCTGCTGTTCGGGGGCATCGGCCAGGTGATCCTCGAAAATGCCGCCACCCGGTTCCTGTTGCAGGGATCGACCTACGACAAGGCGGTCGAAAACAAGATCCTCGATTATTCGGGGTTCGTTCTCGACCTCCTGAAGTCGGTTCGCAACAACAAGCCGAACTACAGCGAGGTCTTCATCGACAGTCCGCTCGGGCTCGGCATCGCTCGCATCGTTGTCGATCCCTTCTCGTACTGGATCAACACGTCGGCGCCCGAGGATGTGGCGGCTTTCGAGGCGCTGGTACGCAGCGGTCGTTCGCCGCTCGAAGCCGTGTGCGAACTGGCGGGCGTGGACCCGCGCGAGATTCTCGGCGAGCGGTCGTTGCCAGCCACCGCGCATGAGCACCTGCCATGA
PROTEIN sequence
Length: 845
VKAPGTRTGGGLTFADLHRGVARDRYSDFLPLVAWVEEEEAFLCIDDGWGYAWELTPAAYMFAHVHQALLGLLNIQFPENSVVQLISFADPLIAPALDQYLDLKTRPDPLIQASARRTHAYLNEGRNGLAALHGIPVRDFRTLLAVKTRAPMHSDLRRQIEEQLAKLGIRRLEPEEMVAFYRRIFNGVFDAAPGVYATAAAAHAAPPIRKQIIDAGPDLAFDGPEVFLGNQVARCLTPKAPARRVTAERANRLTGGMRGSAEDSDQIGGPFLYCLNILFDHSQFEIHKRAQILSAQKAAGSFAVEVGKQIEEIGWVLDEAGNSRFVSVMPCVWVFGRDRHQAREMAARAKRLWESEPLPWMVQEESYLNPILLTASLPFGLYPERRTIRMLERDFKMPVKATALMAPIQTDFRGGGRPALLYTGRKGQLITLDLFDPRINNYNFIVAAESGAGKSFLLNDLCRQYFAQNALIRIIDIGGSYRKLCTLCSGRYIDVGEERLVLNPFDLGLALDGEDKQSAIAMAVAIVAEMANAATRKGVSTSEWNLIKSAVQWTIDEGHADEGIDSVRAWLGAYPQFAAADLDRVDHLKPVARELAFNLRDFGSDGAYGHFFNGPSTFDISSDEFVVLELERLKAIPDLFNVVVMVVINAVTQELYLSARDRPRFVICDETAQFMPNNPGQDLSRLAEAIAQGYRRARKYRGSFGIILQSMNDLLLFGGIGQVILENAATRFLLQGSTYDKAVENKILDYSGFVLDLLKSVRNNKPNYSEVFIDSPLGLGIARIVVDPFSYWINTSAPEDVAAFEALVRSGRSPLEAVCELAGVDPREILGERSLPATAHEHLP*