ggKbase home page

scnpilot_solids1_trim150_scaffold_438_11

Organism: SCNPILOT_SOLID_1_TRIM150_Plasmid_3

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 7804..8145

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B22 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 105.0
  • Bit_score: 119
  • Evalue 2.80e-24
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14626.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 96.0
  • Bit_score: 116
  • Evalue 1.90e-23
conjugal transfer protein; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 101.0
  • Bit_score: 99
  • Evalue 7.20e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera terpenica → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGAAACCGACGAGGTATTACGAACAGATGTCCTTTACATCGGCCTGACCCGTCCAACGACAAAGTTTGGCGTACCGGTTGGAGCTTTCATTTTTGAGGTCTGCATCATTGGCATAGTGTTTATTGCCACTGGCGATCCGTTGTATCTTCTTGCCGTGGTTCCGATACACATTCTGCTTTATGCGGTTTCTTATGAAGATCCGGCCATTTTTACCCTATATAAAATTTGGCTTGCTACGATAGGGCGTTGCAGGAATGTGAAATTCTGGAGTTCAGCCAGTTTCTCACCGCTTCCCAAAGATAAATGGGGCCATTTTTGCAAGTCGCTAAGCCGGACTTGA
PROTEIN sequence
Length: 114
METDEVLRTDVLYIGLTRPTTKFGVPVGAFIFEVCIIGIVFIATGDPLYLLAVVPIHILLYAVSYEDPAIFTLYKIWLATIGRCRNVKFWSSASFSPLPKDKWGHFCKSLSRT*