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scnpilot_solids1_trim150_scaffold_1103_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1103_curated_31
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33205..34080
DNA (876bp) protein (292aa)
sugar ABC transporter permease n=1 Tax=Ruania albidiflava RepID=UPI0003B5F6FD
Sugar ABC transporter permease {ECO:0000313|EMBL:KGJ80386.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
carbohydrate ABC transporter membrane protein; K02026 multiple sugar transport system permease protein
scnpilot_solids1_trim150_scaffold_1103_curated_32
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34089..35327
DNA (1239bp) protein (413aa)
bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Curtobacterium sp. B18 RepID=UPI0003474F0D
Bifunctional D-altronate/D-mannonate dehydratase {ECO:0000313|EMBL:EYT61877.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
mandelate racemase/muconate-lactonizing protein; K08323 starvation sensing protein RspA
scnpilot_solids1_trim150_scaffold_1103_curated_33
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35428..35922
DNA (495bp) protein (165aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000377FDDA
gluconate kinase
scnpilot_solids1_trim150_scaffold_1103_curated_34
Corynebacterium diphtheriae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35996..36895)
DNA (900bp) protein (300aa)
universal stress protein n=1 Tax=Corynebacterium mastitidis RepID=UPI00035F0FBE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEX68435.1}; TaxID=698963 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium diphtheriae (strain ATCC 27012 / C7 (beta)).;"
scnpilot_solids1_trim150_scaffold_1103_curated_35
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37156..37818
DNA (663bp) protein (221aa)
DoxX family protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8U1_VERMA
DoxX family protein
Putative integral membrane protein SCJ12.13c {ECO:0000313|EMBL:CEL19744.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
scnpilot_solids1_trim150_scaffold_1103_curated_36
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37940..39958)
DNA (2019bp) protein (673aa)
GGDEF/EAL domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJL4_OLICO
GGDEF/EAL domain-containing protein
GGDEF/EAL domain protein {ECO:0000313|EMBL:AEI05355.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_1103_curated_37
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39971..41221)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ26_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31226.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1103_curated_38
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41398..42045)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81651.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_39
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(42101..45115)
DNA (3015bp) protein (1005aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE71_NAKMY
scnpilot_solids1_trim150_scaffold_1103_curated_40
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45437..45946
DNA (510bp) protein (170aa)
Pyruvate dehydrogenase complex, E1 component, alpha subunit n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE73_NAKMY
pyruvate dehydrogenase complex, E1 component subunit alpha
Pyruvate dehydrogenase complex, E1 component, alpha subunit {ECO:0000313|EMBL:ACV81657.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_41
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45976..46548)
DNA (573bp) protein (191aa)
UPF0301 protein Namu_5395 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE74_NAKMY
hypothetical protein; K07735 putative transcriptional regulator
UPF0301 protein Namu_5395 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_42
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46712..47989
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE75_NAKMY
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV81659.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_43
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48059..49060)
DNA (1002bp) protein (334aa)
Ribokinase-like domain-containing protein n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0KAH7_9PSEU
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:EHK82313.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
ribokinase-like domain-containing protein
scnpilot_solids1_trim150_scaffold_1103_curated_44
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49057..50001)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PZ84_CATAD
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU71541.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
scnpilot_solids1_trim150_scaffold_1103_curated_45
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49998..50942)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00036F1F8A
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACU71540.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
scnpilot_solids1_trim150_scaffold_1103_curated_46
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51052..52422)
DNA (1371bp) protein (457aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF07_NOCSJ
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABL80392.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_1103_curated_47
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52588..53787
DNA (1200bp) protein (400aa)
ROK family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF06_NOCSJ
ROK family protein
ROK family protein {ECO:0000313|EMBL:ABL80391.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_1103_curated_48
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53784..54569
DNA (786bp) protein (262aa)
glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI0003794FBB
Uncharacterized protein {ECO:0000313|EMBL:AJE39093.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
scnpilot_solids1_trim150_scaffold_1103_curated_49
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54640..55239)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003663FBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS69624.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
scnpilot_solids1_trim150_scaffold_1103_curated_50
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55455..55922
DNA (468bp) protein (156aa)
Putative glyoxalase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3DGS8_9ACTO
Putative glyoxalase {ECO:0000313|EMBL:EMF29155.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
putative glyoxalase
scnpilot_solids1_trim150_scaffold_1103_curated_51
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55940..56866
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034CCAEB
Pyridoxamine 5-phosphate oxidase {ECO:0000313|EMBL:KJY38357.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; K07006
scnpilot_solids1_trim150_scaffold_1103_curated_52
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56827..57450)
DNA (624bp) protein (208aa)
GCN5-related N-acetyltransferase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQP7_NOCSJ
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABL84132.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_1103_curated_53
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57447..59015)
DNA (1569bp) protein (523aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase; K00970 poly(A) polymerase [EC:2.7.7.19]
poly(A) polymerase n=1 Tax=Saccharomonospora saliphila RepID=UPI00036BCAC0
tRNA adenylyltransferase {ECO:0000313|EMBL:EHY89643.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
scnpilot_solids1_trim150_scaffold_1103_curated_54
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59162..60424
DNA (1263bp) protein (421aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W862_KINRD
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ABS03001.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
scnpilot_solids1_trim150_scaffold_1103_curated_55
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60624..61064
DNA (441bp) protein (147aa)
NUDIX hydrolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE77_NAKMY
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV81661.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_56
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61124..63571
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE78_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81662.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_1103_curated_57
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

63568..66996
DNA (3429bp) protein (1143aa)
Integral membrane protein MviN n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE79_NAKMY
Integral membrane protein MviN {ECO:0000313|EMBL:ACV81663.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
integral membrane protein MviN; K03980 virulence factor
scnpilot_solids1_trim150_scaffold_1103_curated_58
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67077..67628
DNA (552bp) protein (184aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Thioredoxin reductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE80_NAKMY
Displaying items 31-58 of 58 in total

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